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      mlo‐based powdery mildew resistance in hexaploid bread wheat generated by a non‐transgenic TILLING approach

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          Summary

          Wheat is one of the most widely grown cereal crops in the world and is an important food grain source for humans. However, wheat yields can be reduced by many abiotic and biotic stress factors, including powdery mildew disease caused by Blumeria graminis f.sp. tritici ( Bgt). Generating resistant varieties is thus a major effort in plant breeding. Here, we took advantage of the non‐transgenic Targeting Induced Lesions IN Genomes ( TILLING) technology to select partial loss‐of‐function alleles of TaMlo, the orthologue of the barley Mlo ( Mildew resistance locus o) gene. Natural and induced loss‐of‐function alleles ( mlo) of barley Mlo are known to confer durable broad‐spectrum powdery mildew resistance, typically at the expense of pleiotropic phenotypes such as premature leaf senescence. We identified 16 missense mutations in the three wheat TaMlo homoeologues, TaMloA1, TaMloB1 and TaMloD1 that each lead to single amino acid exchanges. Using transient gene expression assays in barley single cells, we functionally analysed the different missense mutants and identified the most promising candidates affecting powdery mildew susceptibility. By stacking of selected mutant alleles we generated four independent lines with non‐conservative mutations in each of the three TaMlo homoeologues. Homozygous triple mutant lines and surprisingly also some of the homozygous double mutant lines showed enhanced, yet incomplete, Bgt resistance without the occurrence of discernible pleiotropic phenotypes. These lines thus represent an important step towards the production of commercial non‐transgenic, powdery mildew‐resistant bread wheat varieties.

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          Structural and functional partitioning of bread wheat chromosome 3B.

          We produced a reference sequence of the 1-gigabase chromosome 3B of hexaploid bread wheat. By sequencing 8452 bacterial artificial chromosomes in pools, we assembled a sequence of 774 megabases carrying 5326 protein-coding genes, 1938 pseudogenes, and 85% of transposable elements. The distribution of structural and functional features along the chromosome revealed partitioning correlated with meiotic recombination. Comparative analyses indicated high wheat-specific inter- and intrachromosomal gene duplication activities that are potential sources of variability for adaption. In addition to providing a better understanding of the organization, function, and evolution of a large and polyploid genome, the availability of a high-quality sequence anchored to genetic maps will accelerate the identification of genes underlying important agronomic traits. Copyright © 2014, American Association for the Advancement of Science.
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            The barley Mlo gene: a novel control element of plant pathogen resistance.

            Mutation-induced recessive alleles (mlo) of the barley Mlo locus confer a leaf lesion phenotype and broad spectrum resistance to the fungal pathogen, Erysiphe graminis f. sp. hordei. The gene has been isolated using a positional cloning approach. Analysis of 11 mutagen-induced mlo alleles revealed mutations leading in each case to alterations of the deduced Mlo wild-type amino acid sequence. Susceptible intragenic recombinants, isolated from mlo heteroallelic crosses, show restored Mlo wild-type sequences. The deduced 60 kDa protein is predicted to be membrane-anchored by at least six membrane-spanning helices. The findings are compatible with a dual negative control function of the Mlo protein in leaf cell death and in the onset of pathogen defense; absence of Mlo primes the responsiveness for the onset of multiple defense functions.
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              A reverse genetic, nontransgenic approach to wheat crop improvement by TILLING.

              We report the use of TILLING (targeting induced local lesions in genomes), a reverse genetic, nontransgenic method, to improve a quality trait in a polyploid crop plant. Waxy starches, composed mostly of amylopectin, have unique physiochemical properties. Wheat with only one or two functional waxy genes (granule-bound starch synthase I, or GBSSI) produces starch with intermediate levels of amylopectin. We have identified 246 alleles of the waxy genes by TILLING each homoeolog in 1,920 allohexaploid and allotetraploid wheat individuals. These alleles encode waxy enzymes ranging in activity from near wild type to null, and they represent more genetic diversity than had been described in the preceding 25 years. A line of bread wheat containing homozygous mutations in two waxy homoeologs created through TILLING and a preexisting deletion of the third waxy homoeolog displays a near-null waxy phenotype. This approach to creating and identifying genetic variation shows potential as a tool for crop improvement.
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                Author and article information

                Contributors
                panstruga@bio1.rwth-aachen.de
                Journal
                Plant Biotechnol J
                Plant Biotechnol. J
                10.1111/(ISSN)1467-7652
                PBI
                Plant Biotechnology Journal
                John Wiley and Sons Inc. (Hoboken )
                1467-7644
                1467-7652
                25 September 2016
                March 2017
                : 15
                : 3 ( doiID: 10.1111/pbi.2017.15.issue-3 )
                : 367-378
                Affiliations
                [ 1 ] Unit of Plant Molecular Cell Biology Institute for Biology IRWTH Aachen University AachenGermany
                [ 2 ] Department of Plant Biology and Crop ScienceRothamsted Research West Common Harpenden HertfordshireAL5 2JQ, UK
                Author notes
                [*] [* ] Correspondence (Tel +49 241 8026655; fax +49 241 8022637; email: panstruga@ 123456bio1.rwth-aachen.de )
                Article
                PBI12631
                10.1111/pbi.12631
                5316926
                27565953
                d0a17aba-58d8-4e96-830c-17ee66a8c012
                © 2016 The Authors. Plant Biotechnology Journal published by Society for Experimental Biology and The Association of Applied Biologists and John Wiley & Sons Ltd.

                This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 11 June 2016
                : 12 August 2016
                : 24 August 2016
                Page count
                Figures: 5, Tables: 3, Pages: 12, Words: 10070
                Funding
                Funded by: German Federal Ministry of Food and Agriculture
                Funded by: Specialist Agency for Renewable Resources
                Award ID: 22030411
                Funded by: Germany Society for the Advancement of Plant Innovation
                Award ID: G 135/12 NR
                Funded by: Biotechnology and Biological Sciences Research Council of the U.K
                Award ID: BB/J/00426X/1
                Categories
                Research Article
                Research Articles
                Custom metadata
                2.0
                pbi12631
                March 2017
                Converter:WILEY_ML3GV2_TO_NLMPMC version:5.0.7 mode:remove_FC converted:24.02.2017

                Biotechnology
                targeting induced local lesions in genomes,powdery mildew,mlo,hexaploid bread wheat,blumeria graminis,plant disease resistance

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