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          Abstract

          As principais espécies de vírus envolvidas na etiologia do enrolamento da folha da videira (Vitis spp.) são Grapevine leafroll-associated virus 1 e 3 (GLRaV-1 e -3). Neste estudo da variabilidade desses vírus, foram amplificados dois fragmentos de DNA (396 bp do GLRaV-1 e 602 bp do GLRaV-3) por RT-PCR, a partir de RNA total extraído de nervuras e pecíolos de videiras infetadas, utilizando-se dois pares de oligonucleotídeos. Os DNAs amplificados foram clonados e reamplificados, a partir dos clones recombinantes, e comparados quanto às diferenças conformacionais das fitas simples desnaturadas (SSCP). Foram observados dois padrões distintos de perfis eletroforéticos para cada vírus, tendo sido seqüenciado pelo menos um clone viral correspondente a cada padrão. As duas seqüências de nucleotídeos obtidas para o GLRaV-1 apresentaram maior homologia (79,8% e 87,4%) com um isolado australiano e as duas seqüências relativas ao GLRaV-3 exibiram maior homologia (75,1% e 81,8%) com um isolado norte-americano. Os resultados demonstraram a ocorrência de seqüências variantes destes vírus nas videiras analisadas.

          Translated abstract

          The main viral species associated with grapevine (Vitis spp.) leafroll etiology are Grapevine leafroll-associated virus 1 and 3 (GLRaV-1 and -3). To partially evaluate the variability of these viruses, two DNA fragments (396 bp of GLRaV-1 and 602 bp of GLRaV-3) were amplified by RT-PCR using two sets of primers after total RNA extraction from veins and petioles of infected grapevines. The amplified DNA fragments were cloned and the reamplified viral DNAs, obtained from the recombinant clones, were studied with regard to denatured single-strand DNA conformational differences. Two different electrophoretic profiles were observed for each virus species. At least one viral clone representing each mobility profile was sequenced. The two nucleotide sequences obtained for GLRaV-1 showed the highest homologies (79,8% and 87,4%) with an Australian isolate, whereas the two nucleotide sequences of GLRaV-3 exhibited the highest homologies (75,1% and 81,8%) with a North American isolate. These results demonstrated the occurrence of GLRaV-1 and -3 sequence variants infecting the analysed grapevines.

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          Hábito de crescimento de Colletotrichum gossypii e C. Gossypii var. cephalosporioides em sementes de algodoeiro

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            Generation of cDNAs Specific to Lettuce Infectious Yellows Closterovirus and Other Whitefly-Transmitted Viruses by RT-PCR and Degenerate Oligonucleotide Primers Corresponding to the Closterovirus Gene Encoding the Heat Shock Protein 70 Homolog

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              Polymorphism of the 5′ terminal region of Citrus tristeza virus (CTV) RNA: Incidence of three sequence types in isolates of different origin and pathogenicity

              Sequences of the 5' terminal region of the genomic RNA from eight isolates of Citrus tristeza virus (CTV) were previously classified into three types (I, II and III), with intragroup sequence identity higher than 88% and intergroup sequence identity as low as 44%. Sequencing of an additional 58 cDNA clones from 15 virus isolates showed that all sequences could be unequivocally assigned to one of the three types previously established. The relative frequency of each sequence type was assessed in 57 CTV isolates of different geographic origin and pathogenic characteristics by RT-PCR with sets of type-specific primers using CTV dsRNA as template. None of the isolates yielded amplification of the type I or II sequences alone, but in 19 of them type III sequences were the only amplification product detected. Within isolates containing more than one sequence type, eight had type II and III sequences, 11 had type I and III sequences, and 19 had sequences of the three types. Isolates containing only type III sequences caused only mild to moderate symptoms in Mexican lime, an indicator species for most CTV isolates, whereas isolates causing stem pitting in sweet orange an/or grapefruit, generally contained sequences type II. None of the sequence types could be traced to a precise geographic area, as all types were detected in isolates from at least nine of the 12 countries from which samples were taken.
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                Author and article information

                Contributors
                Role: ND
                Role: ND
                Role: ND
                Role: ND
                Role: ND
                Journal
                fb
                Fitopatologia Brasileira
                Fitopatol. bras.
                Sociedade Brasileira de Fitopatologia (Brasília )
                1678-4677
                April 2005
                : 30
                : 2
                : 177-182
                Affiliations
                [1 ] Embrapa Uva e Vinho Brazil
                [2 ] Instituto Biológico de São Paulo Brazil
                [3 ] Universidade de Caxias do Sul
                Article
                S0100-41582005000200013
                10.1590/S0100-41582005000200013
                d29201f9-5142-4e08-88d1-a76897270aa1

                http://creativecommons.org/licenses/by/4.0/

                History
                Product

                SciELO Brazil

                Self URI (journal page): http://www.scielo.br/scielo.php?script=sci_serial&pid=0100-4158&lng=en
                Categories
                AGRONOMY
                PLANT SCIENCES

                Plant science & Botany,Horticulture
                grapevine,Vitis,GLRaV-1,GLRaV-3,SSCP,videira
                Plant science & Botany, Horticulture
                grapevine, Vitis, GLRaV-1, GLRaV-3, SSCP, videira

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