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      Diversity of Zoanthids (Anthozoa: Hexacorallia) on Hawaiian Seamounts: Description of the Hawaiian Gold Coral and Additional Zoanthids

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      1 , 2 , 3 , 4 , * , 5 , 6
      PLoS ONE
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          Abstract

          The Hawaiian gold coral has a history of exploitation from the deep slopes and seamounts of the Hawaiian Islands as one of the precious corals commercialised in the jewellery industry. Due to its peculiar characteristic of building a scleroproteic skeleton, this zoanthid has been referred as Gerardia sp. (a junior synonym of Savalia Nardo, 1844) but never formally described or examined by taxonomists despite its commercial interest. While collection of Hawaiian gold coral is now regulated, globally seamounts habitats are increasingly threatened by a variety of anthropogenic impacts. However, impact assessment studies and conservation measures cannot be taken without consistent knowledge of the biodiversity of such environments. Recently, multiple samples of octocoral-associated zoanthids were collected from the deep slopes of the islands and seamounts of the Hawaiian Archipelago. The molecular and morphological examination of these zoanthids revealed the presence of at least five different species including the gold coral. Among these only the gold coral appeared to create its own skeleton, two other species are simply using the octocoral as substrate, and the situation is not clear for the final two species. Phylogenetically, all these species appear related to zoanthids of the genus Savalia as well as to the octocoral-associated zoanthid Corallizoanthus tsukaharai, suggesting a common ancestor to all octocoral-associated zoanthids. The diversity of zoanthids described or observed during this study is comparable to levels of diversity found in shallow water tropical coral reefs. Such unexpected species diversity is symptomatic of the lack of biological exploration and taxonomic studies of the diversity of seamount hexacorals.

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          The characterization of enzymatically amplified eukaryotic 16S-like rRNA-coding regions.

          Polymerase chain reaction conditions were established for the in vitro amplification of eukaryotic small subunit ribosomal (16S-like) rRNA genes. Coding regions from algae, fungi, and protozoa were amplified from nanogram quantities of genomic DNA or recombinant plasmids containing rDNA genes. Oligodeoxynucleotides that are complementary to conserved regions at the 5' and 3' termini of eukaryotic 16S-like rRNAs were used to prime DNA synthesis in repetitive cycles of denaturation, reannealing, and DNA synthesis. The fidelity of synthesis for the amplification products was evaluated by comparisons with sequences of previously reported rRNA genes or with primer extension analyses of rRNAs. Fewer than one error per 2000 positions were observed in the amplified rRNA coding region sequences. The primary structure of the 16S-like rRNA from the marine diatom, Skeletonema costatum, was inferred from the sequence of its in vitro amplified coding region.
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            TREEFINDER: a powerful graphical analysis environment for molecular phylogenetics

            Background Most analysis programs for inferring molecular phylogenies are difficult to use, in particular for researchers with little programming experience. Results TREEFINDER is an easy-to-use integrative platform-independent analysis environment for molecular phylogenetics. In this paper the main features of TREEFINDER (version of April 2004) are described. TREEFINDER is written in ANSI C and Java and implements powerful statistical approaches for inferring gene tree and related analyzes. In addition, it provides a user-friendly graphical interface and a phylogenetic programming language. Conclusions TREEFINDER is a versatile framework for analyzing phylogenetic data across different platforms that is suited both for exploratory as well as advanced studies.
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              Extreme longevity in proteinaceous deep-sea corals.

              Deep-sea corals are found on hard substrates on seamounts and continental margins worldwide at depths of 300 to approximately 3,000 m. Deep-sea coral communities are hotspots of deep ocean biomass and biodiversity, providing critical habitat for fish and invertebrates. Newly applied radiocarbon age dates from the deep water proteinaceous corals Gerardia sp. and Leiopathes sp. show that radial growth rates are as low as 4 to 35 mum year(-1) and that individual colony longevities are on the order of thousands of years. The longest-lived Gerardia sp. and Leiopathes sp. specimens were 2,742 years and 4,265 years, respectively. The management and conservation of deep-sea coral communities is challenged by their commercial harvest for the jewelry trade and damage caused by deep-water fishing practices. In light of their unusual longevity, a better understanding of deep-sea coral ecology and their interrelationships with associated benthic communities is needed to inform coherent international conservation strategies for these important deep-sea habitat-forming species.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2013
                9 January 2013
                : 8
                : 1
                : e52607
                Affiliations
                [1 ]Submarine Resources Project, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Kanagawa, Japan
                [2 ]Global Oceanographic Data Center, Japan Agency for Marine-Earth Science and Technology, Nago, Okinawa, Japan
                [3 ]Marine Biodiversity Program, Institute of Biogeoscience, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Kanagawa, Japan
                [4 ]Tropical Biosphere Research Center, University of the Ryukyus, Motobu, Okinawa, Japan
                [5 ]Departamento de Biologia Marina, Fundacion Museo del Mar, Ceuta, North Africa, Spain
                [6 ]Department of Oceanography, Florida State University, Tallahassee, Florida, United States of America
                Heriot-Watt University, United Kingdom
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Conceived and designed the experiments: AB FS. Performed the experiments: FS OO. Analyzed the data: FS OO. Contributed reagents/materials/analysis tools: FS AB OO. Wrote the paper: FS. Histological and morphological examinations: OO. Molecular analyses: FS. External morphology: OO AB FS. Sampling: AB.

                Article
                PONE-D-12-17879
                10.1371/journal.pone.0052607
                3541366
                23326345
                d2d5c284-d99b-4400-9e87-8e4e8596216f
                Copyright @ 2013

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 13 June 2012
                : 19 November 2012
                Page count
                Pages: 13
                Funding
                Specimens were collected by ARB through grants from the Hawaii Undersea Research Laboratory and Hawaii SeaGrant and by the National Oceanic and Atmospheric Administration (NOAA) Office of Ocean Exploration Grant numbers NA04OAR4600071, NA0OAR4600108, and NA03OAR4600110. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology
                Biochemistry
                Nucleic Acids
                DNA
                Computational Biology
                Sequence Analysis
                Ecology
                Ecological Environments
                Marine Environments
                Biodiversity
                Evolutionary Biology
                Evolutionary Systematics
                Taxonomy
                Animal Taxonomy
                Molecular Systematics
                Phylogenetics
                Marine Biology
                Corals
                Zoology
                Animal Phylogenetics
                Animal Taxonomy

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                Uncategorized

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