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      The iron group transition-metal (Fe, Ru, Os) coordination of Se-doped graphitic carbon (Se@g-C 3N 4) nanostructures for the smart therapeutic delivery of zidovudine (ZVD) as an antiretroviral drug: a theoretical calculation perspective†

      research-article
      a , c , a , c , d , , a , b , a , c
      RSC Advances
      The Royal Society of Chemistry

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          Abstract

          This study employed density functional theory (DFT) computational techniques at the ωB97XD/def2svp level of theory to comprehensively explore the electronic behavior of Fe-group transition metal (Fe, Ru, Os) coordination of Se-doped graphitic carbon (Se@g-C 3N 4) nanosystems in the smart delivery of zidovudine (ZVD), an antiretroviral drug. The HOMO–LUMO results of the interactions show a general reduction in energy gap values across all complexes in the following order: ZVD_Se@C 3N 4 < ZVD_Ru_Se@C 3N 4 < ZVD_Fe_Se@C 3N 4 < ZVD_Os_Se@C 3N 4. ZVD_Se@C 3N 4 exhibits the smallest post-interaction band gap of 3.783 eV, while ZVD_Os_Se@C 3N 4 presents the highest energy band gap of 5.438 eV. Results from the corrected adsorption energy (BSSE) revealed that Os_Se@C 3N 4 and Ru_Se@C 3N 4 demonstrated more negative adsorption energies of −2.67 and −2.701 eV, respectively, pointing to a more favorable interaction between ZVD and these systems, thus potentially enhancing the drug delivery efficiency. The investigation into the drug release mechanism from the adsorbents involved a comprehensive examination of the dipole moment and the influence of pH, shedding light on the controlled release of ZVD. Additionally, investigating the energy decomposition analysis (EDA) revealed that ZVD_Ru_Se@C 3N 4 and ZVD_Fe_Se@C 3N 4 exhibited the same total energy of −787.7 kJ mol −1. This intriguing similarity in their total energy levels suggested that their stability was governed by factors beyond reactivity, possibly due to intricate orbital interactions. Furthermore, analyzing the bond dissociation energies showed that all systems exhibited negative enthalpy values, indicating that these systems were exothermic at both surface and interaction levels, thus suggesting that these processes emitted heat, contributing to the surrounding thermal energy.

          Abstract

          This study employed DFT computational techniques at the ωB97XD/def2svp level of theory to explore the electronic behavior of Fe-group transition metal (Fe, Ru, Os) coordination of Se-doped graphitic carbon (Se@g-C 3N 4) nanosystems in the smart delivery of zidovudine (ZVD), an antiretroviral drug.

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          Most cited references98

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          VMD: Visual molecular dynamics

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            Multiwfn: a multifunctional wavefunction analyzer.

            Multiwfn is a multifunctional program for wavefunction analysis. Its main functions are: (1) Calculating and visualizing real space function, such as electrostatic potential and electron localization function at point, in a line, in a plane or in a spatial scope. (2) Population analysis. (3) Bond order analysis. (4) Orbital composition analysis. (5) Plot density-of-states and spectrum. (6) Topology analysis for electron density. Some other useful utilities involved in quantum chemistry studies are also provided. The built-in graph module enables the results of wavefunction analysis to be plotted directly or exported to high-quality graphic file. The program interface is very user-friendly and suitable for both research and teaching purpose. The code of Multiwfn is substantially optimized and parallelized. Its efficiency is demonstrated to be significantly higher than related programs with the same functions. Five practical examples involving a wide variety of systems and analysis methods are given to illustrate the usefulness of Multiwfn. The program is free of charge and open-source. Its precompiled file and source codes are available from http://multiwfn.codeplex.com. Copyright © 2011 Wiley Periodicals, Inc.
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              Bond dissociation energies of organic molecules.

              In this Account we have compiled a list of reliable bond energies that are based on a set of critically evaluated experiments. A brief description of the three most important experimental techniques for measuring bond energies is provided. We demonstrate how these experimental data can be applied to yield the heats of formation of organic radicals and the bond enthalpies of more than 100 representative organic molecules.

                Author and article information

                Journal
                RSC Adv
                RSC Adv
                RA
                RSCACL
                RSC Advances
                The Royal Society of Chemistry
                2046-2069
                21 November 2023
                16 November 2023
                21 November 2023
                : 13
                : 48
                : 34078-34096
                Affiliations
                [a ] Computational and Bio-simulation Research Group, University of Calabar Calabar Nigeria louismuzong@ 123456gmail.com
                [b ] Department of Microbiology, University of Calabar Calabar Nigeria
                [c ] Department of Pure and Applied Chemistry, University of Calabar Calabar Nigeria
                [d ] Centre for Herbal Pharmacology and Environmental Sustainability, Chettinad Hospital and Research Institute, Chettinad Academy of Research and Education Kelambakkam 603103 Tamil Nadu India
                Author information
                https://orcid.org/0000-0002-0286-2865
                https://orcid.org/0000-0002-3514-5758
                Article
                d3ra06885d
                10.1039/d3ra06885d
                10660211
                38020013
                d368c712-6a16-45a4-af1a-25fa33c3a7d8
                This journal is © The Royal Society of Chemistry
                History
                : 10 October 2023
                : 3 November 2023
                Page count
                Pages: 19
                Categories
                Chemistry
                Custom metadata
                Paginated Article

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