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      Ribosomal stress-surveillance: three pathways is a magic number

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      , ,
      Nucleic Acids Research
      Oxford University Press

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          Abstract

          Cells rely on stress response pathways to uphold cellular homeostasis and limit the negative effects of harmful environmental stimuli. The stress- and mitogen-activated protein (MAP) kinases, p38 and JNK, are at the nexus of numerous stress responses, among these the ribotoxic stress response (RSR). Ribosomal impairment is detrimental to cell function as it disrupts protein synthesis, increase inflammatory signaling and, if unresolved, lead to cell death. In this review, we offer a general overview of the three main translation surveillance pathways; the RSR, Ribosome-associated Quality Control (RQC) and the Integrated Stress Response (ISR). We highlight recent advances made in defining activation mechanisms for these pathways and discuss their commonalities and differences. Finally, we reflect on the physiological role of the RSR and consider the therapeutic potential of targeting the sensing kinase ZAKα for treatment of ribotoxin exposure.

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          Most cited references155

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          The integrated stress response.

          In response to diverse stress stimuli, eukaryotic cells activate a common adaptive pathway, termed the integrated stress response (ISR), to restore cellular homeostasis. The core event in this pathway is the phosphorylation of eukaryotic translation initiation factor 2 alpha (eIF2α) by one of four members of the eIF2α kinase family, which leads to a decrease in global protein synthesis and the induction of selected genes, including the transcription factor ATF4, that together promote cellular recovery. The gene expression program activated by the ISR optimizes the cellular response to stress and is dependent on the cellular context, as well as on the nature and intensity of the stress stimuli. Although the ISR is primarily a pro-survival, homeostatic program, exposure to severe stress can drive signaling toward cell death. Here, we review current understanding of the ISR signaling and how it regulates cell fate under diverse types of stress.
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            Activation and function of the MAPKs and their substrates, the MAPK-activated protein kinases.

            The mitogen-activated protein kinases (MAPKs) regulate diverse cellular programs by relaying extracellular signals to intracellular responses. In mammals, there are more than a dozen MAPK enzymes that coordinately regulate cell proliferation, differentiation, motility, and survival. The best known are the conventional MAPKs, which include the extracellular signal-regulated kinases 1 and 2 (ERK1/2), c-Jun amino-terminal kinases 1 to 3 (JNK1 to -3), p38 (α, β, γ, and δ), and ERK5 families. There are additional, atypical MAPK enzymes, including ERK3/4, ERK7/8, and Nemo-like kinase (NLK), which have distinct regulation and functions. Together, the MAPKs regulate a large number of substrates, including members of a family of protein Ser/Thr kinases termed MAPK-activated protein kinases (MAPKAPKs). The MAPKAPKs are related enzymes that respond to extracellular stimulation through direct MAPK-dependent activation loop phosphorylation and kinase activation. There are five MAPKAPK subfamilies: the p90 ribosomal S6 kinase (RSK), the mitogen- and stress-activated kinase (MSK), the MAPK-interacting kinase (MNK), the MAPK-activated protein kinase 2/3 (MK2/3), and MK5 (also known as p38-regulated/activated protein kinase [PRAK]). These enzymes have diverse biological functions, including regulation of nucleosome and gene expression, mRNA stability and translation, and cell proliferation and survival. Here we review the mechanisms of MAPKAPK activation by the different MAPKs and discuss their physiological roles based on established substrates and recent discoveries.
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              An integrated stress response regulates amino acid metabolism and resistance to oxidative stress.

              Eukaryotic cells respond to unfolded proteins in their endoplasmic reticulum (ER stress), amino acid starvation, or oxidants by phosphorylating the alpha subunit of translation initiation factor 2 (eIF2alpha). This adaptation inhibits general protein synthesis while promoting translation and expression of the transcription factor ATF4. Atf4(-/-) cells are impaired in expressing genes involved in amino acid import, glutathione biosynthesis, and resistance to oxidative stress. Perk(-/-) cells, lacking an upstream ER stress-activated eIF2alpha kinase that activates Atf4, accumulate endogenous peroxides during ER stress, whereas interference with the ER oxidase ERO1 abrogates such accumulation. A signaling pathway initiated by eIF2alpha phosphorylation protects cells against metabolic consequences of ER oxidation by promoting the linked processes of amino acid sufficiency and resistance to oxidative stress.
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                Author and article information

                Contributors
                Journal
                Nucleic Acids Res
                Nucleic Acids Res
                nar
                Nucleic Acids Research
                Oxford University Press
                0305-1048
                1362-4962
                04 November 2020
                17 September 2020
                17 September 2020
                : 48
                : 19
                : 10648-10661
                Affiliations
                Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen , Blegdamsvej 3B, DK-2200 Copenhagen, Denmark
                Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen , Blegdamsvej 3B, DK-2200 Copenhagen, Denmark
                Center for Healthy Aging, Department of Cellular and Molecular Medicine, University of Copenhagen , Blegdamsvej 3B, DK-2200 Copenhagen, Denmark
                Author notes
                To whom correspondence should be addressed. Tel: +45 35 25 50 24; Email: sbj@ 123456sund.ku.dk
                Author information
                http://orcid.org/0000-0002-7308-4597
                Article
                gkaa757
                10.1093/nar/gkaa757
                7641731
                32941609
                d57c799e-df64-4a47-8347-1e3c0dfd8f2e
                © The Author(s) 2020. Published by Oxford University Press on behalf of Nucleic Acids Research.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 06 September 2020
                : 28 August 2020
                : 29 July 2020
                Page count
                Pages: 14
                Funding
                Funded by: Lundbeck Foundation, DOI 10.13039/501100003554;
                Award ID: R190-2014-4037
                Funded by: NEYE Foundation;
                Funded by: Danish Medical Research Council, DOI 10.13039/100008392;
                Award ID: 9039-00007B
                Funded by: European Research Council, DOI 10.13039/100010663;
                Award ID: 863911-PHYRIST
                Categories
                AcademicSubjects/SCI00010
                Survey and Summary

                Genetics
                Genetics

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