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      Systematic comparison of plasma EBV DNA, anti‐EBV antibodies and miRNA levels for early detection and prognosis of nasopharyngeal carcinoma

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          Abstract

          Nasopharyngeal carcinoma (NPC) is originated from the epithelial cells of nasopharynx, Epstein–Barr virus (EBV)‐associated and has the highest incidence and mortality rates in Southeast Asia. Late presentation is a common issue and early detection could be the key to reduce the disease burden. Sensitivity of plasma EBV DNA, an established NPC biomarker, for Stage I NPC is controversial. Most newly reported NPC biomarkers have neither been externally validated nor compared to the established ones. This causes difficulty in planning for cost‐effective early detection strategies. Our study systematically evaluated six established and four new biomarkers in NPC cases, population controls and hospital controls. We showed that BamHI‐W 76 bp remains the most sensitive plasma biomarker, with 96.7% (29/30), 96.7% (58/60) and 97.4% (226/232) sensitivity to detect Stage I, early stage and all NPC, respectively. Its specificity was 94.2% (113/120) against population controls and 90.4% (113/125) against hospital controls. Diagnostic accuracy of BamHI‐W 121 bp and ebv‐miR‐BART7‐3p were validated. Hsa‐miR‐29a‐3p and hsa‐miR‐103a‐3p were not, possibly due to lower number of advanced stage NPC cases included in this subset. Decision tree modeling suggested that combination of BamHI‐W 76 bp and VCA IgA or EA IgG may increase the specificity or sensitivity to detect NPC. EBNA1 99 bp could identify NPC patients with poor prognosis in early and advanced stage NPC. Our findings provided evidence for improvement in NPC screening strategies, covering considerations of opportunistic screening, combining biomarkers to increase sensitivity or specificity and testing biomarkers from single sampled specimen to avoid logistic problems of resampling.

          Abstract

          What's new?

          Plasma Epstein–Barr virus (EBV) DNA is an established nasopharyngeal carcinoma (NPC) biomarker, but not all cases are associated with EBV and its sensitivity for stage I NPC remains controversial. Meanwhile, most newly‐reported NPC biomarkers have neither been externally validated nor compared to established biomarkers. This study systematically evaluates six established and four new biomarkers in NPC cases, population controls, and hospital controls. The findings provide evidence to policymakers for improvement in NPC screening and monitoring strategies, covering considerations of opportunistic screening, combining biomarkers to increase sensitivity/specificity, and testing multiple biomarkers on single specimens to avoid the logistic problems of resampling.

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          Most cited references31

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          Global burden of deaths from Epstein-Barr virus attributable malignancies 1990-2010

          Background Epstein-Barr virus (EBV) is an oncogenic virus implicated in the pathogenesis of a number of human malignancies of both lymphoid and epithelial origin. Thus, a comprehensive and up-to-date analysis focused on the global burden of EBV-attributable malignancies is of significant interest. Methods Based on published studies, we estimated the proportion of Burkitt’s lymphoma (BL), Hodgkin’s lymphoma (HL), nasopharyngeal carcinoma NPC), gastric carcinoma (GC) and post-transplant lymphoproliferative disease (PTLD) attributable to EBV, taking into consideration age, sex and geographical variations. This proportion was then imputed into the Global Burden of Disease 2010 dataset to determine the global burden of each EBV-attributable malignancy in males and females in 20 different age groups and 21 world regions from 1990 to 2010. Results The analysis showed that the combined global burden of deaths in 2010 from all EBV-attributable malignancies was 142,979, representing 1.8% of all cancer deaths. This burden has increased by 14.6% over a period of 20 years. All 5 EBV-attributable malignancies were more common in males in all geographical regions (ratio of 2.6:1). Gastric cancer and NPC accounted for 92% of all EBV-attributable cancer deaths. Almost 50% of EBV-attributed malignancies occurred in East Asia. This region also had the highest age-standardized death rates for both NPC and GC. Conclusions Approximately 143,000 deaths in 2010 were attributed to EBV-associated malignancies. This figure is likely to be an underestimate since some of the less prevalent EBV-associated malignancies have not been included. Moreover, the global increase in population and life-expectancy will further increase the overall burden of EBV-associated cancer deaths. Development of a suitable vaccine could have a substantial impact on reducing this burden. Electronic supplementary material The online version of this article (doi:10.1186/1750-9378-9-38) contains supplementary material, which is available to authorized users.
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            Sequencing-based counting and size profiling of plasma Epstein–Barr virus DNA enhance population screening of nasopharyngeal carcinoma

            Significance We identified differentiating molecular characteristics of plasma EBV DNA between nasopharyngeal carcinoma (NPC) patients and non-NPC subjects. Sequencing-based analysis revealed higher amounts of plasma EBV DNA and generally longer fragment lengths of plasma viral molecules in NPC patients than in non-NPC subjects. Based on these findings, we have developed a highly accurate blood-based test for screening of NPC. Such an approach is shown to enhance the positive predictive value and demonstrate a superior performance for NPC screening. It also obviates the need of a follow-up blood sample and therefore allows single time-point testing. We believe that this more clinically practical protocol would facilitate NPC screening on a population scale.
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              Catastrophic health expenditure and 12-month mortality associated with cancer in Southeast Asia: results from a longitudinal study in eight countries

              (2015)
              Background One of the biggest obstacles to developing policies in cancer care in Southeast Asia is lack of reliable data on disease burden and economic consequences. In 2012, we instigated a study of new cancer patients in the Association of Southeast Asian Nations (ASEAN) region – the Asean CosTs In ONcology (ACTION) study – to assess the economic impact of cancer. Methods The ACTION study is a prospective longitudinal study of 9,513 consecutively recruited adult patients with an initial diagnosis of cancer. Twelve months after diagnosis, we recorded death and household financial catastrophe (out-of-pocket medical costs exceeding 30 % of annual household income). We assessed the effect on these two outcomes of a range of socio-demographic, clinical, and economic predictors using a multinomial regression model. Results The mean age of participants was 52 years; 64 % were women. A year after diagnosis, 29 % had died, 48 % experienced financial catastrophe, and just 23 % were alive with no financial catastrophe. The risk of dying from cancer and facing catastrophic payments was associated with clinical variables, such as a more advanced disease stage at diagnosis, and socioeconomic status pre-diagnosis. Participants in the low income category within each country had significantly higher odds of financial catastrophe (odds ratio, 5.86; 95 % confidence interval, 4.76–7.23) and death (5.52; 4.34–7.02) than participants with high income. Those without insurance were also more likely to experience financial catastrophe (1.27; 1.05–1.52) and die (1.51; 1.21–1.88) than participants with insurance. Conclusions A cancer diagnosis in Southeast Asia is potentially disastrous, with over 75 % of patients experiencing death or financial catastrophe within one year. This study adds compelling evidence to the argument for policies that improve access to care and provide adequate financial protection from the costs of illness. Electronic supplementary material The online version of this article (doi:10.1186/s12916-015-0433-1) contains supplementary material, which is available to authorized users.
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                Author and article information

                Contributors
                luping@imr.gov.my
                Journal
                Int J Cancer
                Int. J. Cancer
                10.1002/(ISSN)1097-0215
                IJC
                International Journal of Cancer
                John Wiley & Sons, Inc. (Hoboken, USA )
                0020-7136
                1097-0215
                08 October 2019
                15 April 2020
                : 146
                : 8 ( doiID: 10.1002/ijc.v146.8 )
                : 2336-2347
                Affiliations
                [ 1 ] Molecular Pathology Unit, Cancer Research Centre Institute for Medical Research, Ministry of Health Malaysia Kuala Lumpur Malaysia
                [ 2 ] Department of Medical Sciences, School of Healthcare and Medical Sciences Sunway University Selangor Malaysia
                [ 3 ] Department of Pathology and Medical Biology University of Groningen, University Medical Center Groningen Groningen The Netherlands
                [ 4 ] Faculty of Science, University of Malaya Institute of Biological Sciences Kuala Lumpur Malaysia
                [ 5 ] Department of Biochemistry School of Biomedical Sciences, University of Otago Dunedin New Zealand
                [ 6 ] Haematology Unit, Cancer Research Centre Institute for Medical Research, Ministry of Health Malaysia Kuala Lumpur Malaysia
                [ 7 ] Department of Otorhinolaryngology Sarawak General Hospital, Ministry of Health Malaysia, Jalan Hospital Kuching Sarawak Malaysia
                [ 8 ] Department of Otorhinolaryngology Queen Elizabeth Hospital, Ministry of Health Malaysia Kota Kinabalu Sabah Malaysia
                [ 9 ] Department of Otorhinolaryngology Kuala Lumpur Hospital, Ministry of Health Malaysia Kuala Lumpur Malaysia
                [ 10 ] Department of Surgery, Clinical Campus Faculty of Medicine and Health Sciences University Putra Malaysia at Kuala Lumpur Hospital, Ministry of Health Malaysia Kuala Lumpur Malaysia
                [ 11 ] Department of Otorhinolaryngology Selayang Hospital, Ministry of Health Malaysia Batu Caves Selangor Malaysia
                [ 12 ] Department of Otorhinolaryngology Pulau Pinang Hospital, Ministry of Health Malaysia Georgetown Pulau Pinang Malaysia
                [ 13 ] Gleneagles Kuala Lumpur Hospital Kuala Lumpur Malaysia
                [ 14 ] Sunway Medical Centre Bandar Sunway Selangor Malaysia
                Author notes
                [*] [* ] Correspondence to: Tan Lu Ping, Molecular Pathology Unit, Cancer Research Centre, Institute for Medical Research, Ministry of Health Malaysia, Jalan Pahang, 50588 Kuala Lumpur, Malaysia, Tel.: +603‐2616‐2727, Fax: +603‐2616‐2536, E‐mail: luping@ 123456imr.gov.my
                [†]

                Hospital Pulau Pinang: K.C. Pua (Project Leader), S. Subathra, N. Punithavati, B.S. Tan, Y.S. Ee, L.M. Ong, R.A. Hamid, M. Goh, J.C.T. Quah, J. Lim; Hospital Kuala Lumpur/Universiti Putra Malaysia: Y.Y. Yap, B.D. Dipak, R. Deepak, F.N. Lau, P.V. Kam, S. Shri Devi; Queen Elizabeth Hospital: C.A. Ong, C.L. Lum, Ahmad NA, Halimuddin S., M. Somasundran, A. Kam, M. Wodjin; Sarawak General Hospital/Universiti Malaysia Sarawak: S.K. Subramaniam, T.S. Tiong, T.Y. Tan, U.H. Sim, T.W. Tharumalingam, D. Norlida, M. Zulkarnaen, W.H. Lai; University of Malaya: G. Gopala Krishnan, C.C. Ng, A.Z. Bustam, S. Marniza, P. Shahfinaz, O. Hashim, S. Shamshinder, N. Prepageran, L.M. Looi, O. Rahmat, J. Amin, J. Maznan; Hospital Universiti Sains Malaysia: S. Hassan, B.Biswal; Cancer Research Initiatives Foundation: S.H. Teo, L.F. Yap; Institute for Medical Research: A.S.B. Khoo (Program Leader), A. Munirah, A. Subasri, L.P. Tan, W.R. Kim, X.J. Ng, V.M. Sivanesan, A.A. Anuar, F.I. Abdul Rahman, C.S.H. Ong, N.A. Adam, H. Siti Khodijah, M.D. Nor Soleha, S. Chew, G.W. Tan, N.M. Kumaran, M.S. Nurul Ashikin, M.S. Nursyazwani, B. Norhasimah, R. Sasela Devi, S. Shri Devi, C.Y. Koh.

                Author information
                https://orcid.org/0000-0002-7934-2462
                https://orcid.org/0000-0003-3872-3485
                https://orcid.org/0000-0002-3223-9265
                https://orcid.org/0000-0001-7015-0125
                https://orcid.org/0000-0002-5996-8409
                https://orcid.org/0000-0002-8268-5271
                Article
                IJC32656
                10.1002/ijc.32656
                7065012
                31469434
                d6d13770-6fca-497c-8588-e96ba11e5a27
                © 2019 The Authors. International Journal of Cancer published by John Wiley & Sons Ltd on behalf of UICC

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 08 March 2019
                : 17 July 2019
                : 15 August 2019
                Page count
                Figures: 4, Tables: 2, Pages: 12, Words: 9093
                Funding
                Funded by: Ministry of Health Malaysia
                Award ID: NMRR‐11‐597‐9667
                Award ID: NMRR‐12‐1183‐14034
                Award ID: NMRR‐16‐1439‐30762
                Categories
                Tumor Markers and Signatures
                Tumor Markers and Signatures
                Custom metadata
                2.0
                15 April 2020
                Converter:WILEY_ML3GV2_TO_JATSPMC version:5.7.7 mode:remove_FC converted:11.03.2020

                Oncology & Radiotherapy
                systematic comparison,biomarkers,early detection,prognosis,epstein–barr virus,nasopharyngeal carcinoma

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