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      Automatic cone photoreceptor segmentation using graph theory and dynamic programming

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          Abstract

          Geometrical analysis of the photoreceptor mosaic can reveal subclinical ocular pathologies. In this paper, we describe a fully automatic algorithm to identify and segment photoreceptors in adaptive optics ophthalmoscope images of the photoreceptor mosaic. This method is an extension of our previously described closed contour segmentation framework based on graph theory and dynamic programming (GTDP). We validated the performance of the proposed algorithm by comparing it to the state-of-the-art technique on a large data set consisting of over 200,000 cones and posted the results online. We found that the GTDP method achieved a higher detection rate, decreasing the cone miss rate by over a factor of five.

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          Most cited references46

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          Adaptive optics scanning laser ophthalmoscopy.

          We present the first scanning laser ophthalmoscope that uses adaptive optics to measure and correct the high order aberrations of the human eye. Adaptive optics increases both lateral and axial resolution, permitting axial sectioning of retinal tissue in vivo. The instrument is used to visualize photoreceptors, nerve fibers and flow of white blood cells in retinal capillaries.
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            Is Open Access

            Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation

            Segmentation of anatomical and pathological structures in ophthalmic images is crucial for the diagnosis and study of ocular diseases. However, manual segmentation is often a time-consuming and subjective process. This paper presents an automatic approach for segmenting retinal layers in Spectral Domain Optical Coherence Tomography images using graph theory and dynamic programming. Results show that this method accurately segments eight retinal layer boundaries in normal adult eyes more closely to an expert grader as compared to a second expert grader.
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              The arrangement of the three cone classes in the living human eye.

              Human colour vision depends on three classes of receptor, the short- (S), medium- (M), and long- (L) wavelength-sensitive cones. These cone classes are interleaved in a single mosaic so that, at each point in the retina, only a single class of cone samples the retinal image. As a consequence, observers with normal trichromatic colour vision are necessarily colour blind on a local spatial scale. The limits this places on vision depend on the relative numbers and arrangement of cones. Although the topography of human S cones is known, the human L- and M-cone submosaics have resisted analysis. Adaptive optics, a technique used to overcome blur in ground-based telescopes, can also overcome blur in the eye, allowing the sharpest images ever taken of the living retina. Here we combine adaptive optics and retinal densitometry to obtain what are, to our knowledge, the first images of the arrangement of S, M and L cones in the living human eye. The proportion of L to M cones is strikingly different in two male subjects, each of whom has normal colour vision. The mosaics of both subjects have large patches in which either M or L cones are missing. This arrangement reduces the eye's ability to recover colour variations of high spatial frequency in the environment but may improve the recovery of luminance variations of high spatial frequency.
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                Author and article information

                Journal
                Biomed Opt Express
                Biomed Opt Express
                BOE
                Biomedical Optics Express
                Optical Society of America
                2156-7085
                22 May 2013
                01 June 2013
                22 May 2013
                : 4
                : 6
                : 924-937
                Affiliations
                [1 ]Department of Biomedical Engineering, Duke University, Durham, North Carolina 27708, USA
                [2 ]Department of Biostatistics & Bioinformatics, Duke University, Durham, North Carolina 27708, USA
                [3 ]Department of Ophthalmology, Duke University Medical Center, Durham, North Carolina 27710, USA
                [4 ]Department of Ophthalmology, Medical College of Wisconsin, Milwaukee, Wisconsin 53226, USA
                [5 ]Department of Biophysics, Medical College of Wisconsin, Milwaukee, Wisconsin 53226, USA
                [6 ]Department of Electrical and Computer Engineering, Duke University, Durham, North Carolina 27708, USA
                Author notes
                Article
                186866
                10.1364/BOE.4.000924
                3675871
                23761854
                d84b0b1a-b92e-471b-beb0-dace35115b7f
                ©2013 Optical Society of America

                author-open

                History
                : 12 March 2013
                : 13 May 2013
                : 17 May 2013
                Funding
                Funded by: BrightFocus Foundation, NIH
                Award ID: 1R01EY022691-01
                Funded by: Research to Prevent Blindness
                Funded by: Foundation Fighting Blindness, NIH
                Award ID: R01EY017607
                Award ID: P30EY001931
                Funded by: NIH
                Award ID: 1R01EY022691-01
                Categories
                Research-Article
                Custom metadata
                True
                0

                Vision sciences
                (100.0100) image processing,(170.4470) ophthalmology,(110.1080) active or adaptive optics

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