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      An Antibody Screen of a Plasmodium vivax Antigen Library Identifies Novel Merozoite Proteins Associated with Clinical Protection

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          Summary

          Whereas the genome of P. vivax contains more than 5000 genes encoding proteins, only a handful of proteins have been investigated as targets of naturally acquired immunity against this parasite. A comprehensive and systematic characterization of antibody responses to P. vivax antigens in exposed populations is thus urgently needed. In this work, we investigated antibody responses to a library of 34 P. vivax entire ectodomain proteins known or predicted to be involved in merozoite invasion in two Asia-Pacific populations, analyzing the relationship of antibody levels with markers of current and cumulative malaria exposure, socio-economic and clinical indicators.

          IgG recognition by samples collected from Solomon Islanders differed significantly between proteins, and 29 proteins were considered immunogenic (P < 0.001-0.018). Significant increases in IgG levels with age were observed for most proteins (P < 0.001-0.027). However, IgG responses to only a few proteins were significantly higher in the setting of concurrent asymptomatic PCR- or microscopy-detected P. vivax infections. These results suggest that IgG responses to these proteins relate more to cumulative lifetime rather than concurrent exposure to P. vivax.

          In samples collected at the start of 16 months of follow-up of 264 1-3 years old children from an area of high malaria endemicity in Papua New Guinea (PNG), we identified a strong association between reduced risk of clinical disease and high antibody levels to P12, P41, and a novel hypothetical protein not previously studied, PVX_081550 (incidence rate ratio [IRR] 0.46- 0.74, P < 0.001-0.041). These data emphasize the benefits of an unbiased screening approach in identifying new antigenic targets of natural immunity against malaria. Further molecular/functional characterization is necessary to define whether P12, P41 and PVX_081550 are interesting candidates for vaccine development, or whether antibodies to these proteins act only as biomarkers of acquired immunity.

          Abstract

          Background

          Elimination of Plasmodium vivax malaria would be greatly facilitated by the development of an effective vaccine. A comprehensive and systematic characterization of antibodies to P. vivax antigens in exposed populations is useful in guiding rational vaccine design.

          Methodology/Principal Findings

          In this study, we investigated antibodies to a large library of P. vivax entire ectodomain merozoite proteins in 2 Asia-Pacific populations, analysing the relationship of antibody levels with markers of current and cumulative malaria exposure, and socioeconomic and clinical indicators. 29 antigenic targets of natural immunity were identified. Of these, 12 highly-immunogenic proteins were strongly associated with age and thus cumulative lifetime exposure in Solomon Islanders ( P<0.001–0.027). A subset of 6 proteins, selected on the basis of immunogenicity and expression levels, were used to examine antibody levels in plasma samples from a population of young Papua New Guinean children with well-characterized individual differences in exposure. This analysis identified a strong association between reduced risk of clinical disease and antibody levels to P12, P41, and a novel hypothetical protein that has not previously been studied, PVX_081550 (IRR 0.46–0.74; P<0.001–0.041).

          Conclusion/Significance

          These data emphasize the benefits of an unbiased screening approach in identifying novel vaccine candidate antigens. Functional studies are now required to establish whether PVX_081550 is a key component of the naturally-acquired protective immune response, a biomarker of immune status, or both.

          Author Summary

          Plasmodium vivax is now the predominant malaria parasite outside Africa. Because P. vivax can remain dormant in the liver for months, identifying and treating P. vivax in asymptomatic individuals is difficult. Additionally, current widely-used vector control measures are less efficient against mosquitoes that transmit P. vivax. An effective vaccine would therefore immensely facilitate P. vivax elimination. Unfortunately, little is known about P. vivax biology and only a few proteins have been investigated as targets for vaccine development. To address these knowledge gaps, we measured antibody levels to 34 entire ectodomain proteins predicted to be involved in P. vivax invasion of erythrocytes, in samples from individuals living in 2 malaria-endemic Asia-Pacific countries. We found that antibodies in malaria-exposed Solomon Islanders were reactive to the majority of proteins in our panel, and that antibodies to 12 of these proteins strongly reflected cumulative life-time exposure to P. vivax. In samples from Papua New Guinea children, we identified an association between antibodies to 3 proteins and protection against clinical malaria. Our results demonstrate that screening antibodies to a large number of P. vivax proteins is a useful approach in identifying novel targets of immunity. Functional studies are now required to establish whether these proteins are biomarkers of an individual’s immune status, potential vaccine candidates that warrant further development, or both.

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          Most cited references40

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          Comparative genomics of the neglected human malaria parasite Plasmodium vivax.

          The human malaria parasite Plasmodium vivax is responsible for 25-40% of the approximately 515 million annual cases of malaria worldwide. Although seldom fatal, the parasite elicits severe and incapacitating clinical symptoms and often causes relapses months after a primary infection has cleared. Despite its importance as a major human pathogen, P. vivax is little studied because it cannot be propagated continuously in the laboratory except in non-human primates. We sequenced the genome of P. vivax to shed light on its distinctive biological features, and as a means to drive development of new drugs and vaccines. Here we describe the synteny and isochore structure of P. vivax chromosomes, and show that the parasite resembles other malaria parasites in gene content and metabolic potential, but possesses novel gene families and potential alternative invasion pathways not recognized previously. Completion of the P. vivax genome provides the scientific community with a valuable resource that can be used to advance investigation into this neglected species.
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            Key gaps in the knowledge of Plasmodium vivax, a neglected human malaria parasite.

            Plasmodium vivax is geographically the most widely distributed cause of malaria in people, with up to 2.5 billion people at risk and an estimated 80 million to 300 million clinical cases every year--including severe disease and death. Despite this large burden of disease, P vivax is overlooked and left in the shadow of the enormous problem caused by Plasmodium falciparum in sub-Saharan Africa. The technological advances enabling the sequencing of the P vivax genome and a recent call for worldwide malaria eradication have together placed new emphasis on the importance of addressing P vivax as a major public health problem. However, because of this parasite's biology, it is especially difficult to interrupt the transmission of P vivax, and experts agree that the available methods for preventing and treating infections with P vivax are inadequate. It is thus imperative that the development of new methods and strategies become a priority. Advancing the development of such methods needs renewed emphasis on understanding the biology, pathogenesis, and epidemiology of P vivax. This Review critically examines what is known about P vivax, focusing on identifying the crucial gaps that create obstacles to the elimination of this parasite in human populations.
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              The dominant Anopheles vectors of human malaria in the Asia-Pacific region: occurrence data, distribution maps and bionomic précis

              Background The final article in a series of three publications examining the global distribution of 41 dominant vector species (DVS) of malaria is presented here. The first publication examined the DVS from the Americas, with the second covering those species present in Africa, Europe and the Middle East. Here we discuss the 19 DVS of the Asian-Pacific region. This region experiences a high diversity of vector species, many occurring sympatrically, which, combined with the occurrence of a high number of species complexes and suspected species complexes, and behavioural plasticity of many of these major vectors, adds a level of entomological complexity not comparable elsewhere globally. To try and untangle the intricacy of the vectors of this region and to increase the effectiveness of vector control interventions, an understanding of the contemporary distribution of each species, combined with a synthesis of the current knowledge of their behaviour and ecology is needed. Results Expert opinion (EO) range maps, created with the most up-to-date expert knowledge of each DVS distribution, were combined with a contemporary database of occurrence data and a suite of open access, environmental and climatic variables. Using the Boosted Regression Tree (BRT) modelling method, distribution maps of each DVS were produced. The occurrence data were abstracted from the formal, published literature, plus other relevant sources, resulting in the collation of DVS occurrence at 10116 locations across 31 countries, of which 8853 were successfully geo-referenced and 7430 were resolved to spatial areas that could be included in the BRT model. A detailed summary of the information on the bionomics of each species and species complex is also presented. Conclusions This article concludes a project aimed to establish the contemporary global distribution of the DVS of malaria. The three articles produced are intended as a detailed reference for scientists continuing research into the aspects of taxonomy, biology and ecology relevant to species-specific vector control. This research is particularly relevant to help unravel the complicated taxonomic status, ecology and epidemiology of the vectors of the Asia-Pacific region. All the occurrence data, predictive maps and EO-shape files generated during the production of these publications will be made available in the public domain. We hope that this will encourage data sharing to improve future iterations of the distribution maps.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                16 May 2016
                May 2016
                : 10
                : 5
                : e0004639
                Affiliations
                [1 ]Population Health and Immunity Division, Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
                [2 ]Department of Medical Biology, University of Melbourne, Melbourne, Australia
                [3 ]Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, United States of America
                [4 ]Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, United Kingdom
                [5 ]Center for Outbreak Analysis and Modelling, Department of Infectious Disease Epidemiology, Imperial College London, London, United Kingdom
                [6 ]Vector Borne Diseases Unit, PNG Institute of Medical Research, Madang, Papua New Guinea
                [7 ]National Health Training & Research Institute, Ministry of Health, Honiara, Solomon Islands
                [8 ]Center for Global Health & Diseases, Case Western Reserve University, Cleveland, Ohio, United States of America
                [9 ]ISGlobal, Barcelona Ctr. Int. Health Res. (CRESIB), Hospital Clínic, Universitat de Barcelona, Barcelona, Spain
                Queensland Institute of Medical Research, AUSTRALIA
                Author notes

                The authors have declared that no competing interests exist.

                Conceived and designed the experiments: IM RMF JCR PS. Performed the experiments: CTF JBH. Analyzed the data: CTF MTW CSNLWS IM. Contributed reagents/materials/analysis tools: SS BK AWD AW CLK EL. Wrote the paper: CTF JBH CK JCR RMF IM.

                ‡ These authors are joint senior authors on this work.

                Article
                PNTD-D-15-02167
                10.1371/journal.pntd.0004639
                4868274
                27182597
                d84f9f4c-fa8b-444d-aa59-48979b36cbe2

                This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

                History
                : 28 December 2015
                : 29 March 2016
                Page count
                Figures: 4, Tables: 1, Pages: 15
                Funding
                Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
                Award ID: U19AI089686
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100000060, National Institute of Allergy and Infectious Diseases;
                Award ID: AI063135
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100006492, Division of Intramural Research, National Institute of Allergy and Infectious Diseases;
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100000925, National Health and Medical Research Council;
                Award ID: #1021544
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100000925, National Health and Medical Research Council;
                Award ID: 1043345
                Award Recipient :
                Funded by: Malaria Elimination Science Alliance (MESA)
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/501100000265, Medical Research Council;
                Award ID: MR/J002283/1
                Award Recipient :
                Funded by: funder-id http://dx.doi.org/10.13039/100004440, Wellcome Trust;
                Award ID: 098051
                Award Recipient :
                Funded by: Victorian State Government Operational Infrastructure Support and Australian Government NHMRC IRIISS
                This study was funded in part by the Southwest Pacific International Centre of Excellence in Malaria Research (NIH grant U19AI089686 “Research to control and eliminate malaria in the Southwest Pacific”), the National Institutes of Health (AI063135), the Intramural Research Program, National Institute of Allergy and Infectious Diseases, National Institutes of Health), the National Health & Medical Research Council (#1021544), the Malaria Elimination Science Alliance (MESA), the Wellcome Trust (#098051), and the UK Medical Research Council (MR/J002283/1). This work was also made possible through Victorian State Government Operational Infrastructure Support and Australian Government NHMRC IRIISS. IM is supported by an NHMRC Senior Research Fellowship (#1043345) and CTF is supported by the University of Melbourne – Melbourne International Postgraduate Scholarship. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology and Life Sciences
                Parasitology
                Parasite Groups
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                Plasmodium
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                Biochemistry
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                Custom metadata
                Data has been deposited in Dryad: dryad.pn8mn">dryad.pn8mn">dryad.pn8mn"> http://dx.doi.org/10.5061/_tmp_url_2_8mn. PNG data cannot be made publicly available because it would compromise participant privacy and violates the ethical agreement in the informed consent forms. Data is available upon reasonable request by contacting the PNG Medical Research Advisory Committee and the PNG Institute of Medical Research IRB. The contact is Dr. William Pomat, secretary PNG IMR IRB: William.Pomat@ 123456pngimr.org.pg .

                Parasitology,Statistics,Bioinformatics & Computational biology,Genetics,Infectious disease & Microbiology
                clinical disease,IgG,vaccine,Plasmodium vivax,elimination,protection,antibodies

                Comments

                Malaria vaccine development collection topic 5) Identifying and developing the new generation of malaria vaccines - Making use of reverse vaccinology and serology information:

                See https://www.scienceopen.com/collection/malariavaccine

                 

                In this study, we made use of the P. vivax protein library developed by Hostetler et al. to show that several of the novel and little studied proteins were immunogenic in Asia-Pacific populations. We showed that Papua New Guinean children with high antibody levels to 3 novel proteins (Pv12, Pv41 and PVX_081550) had less clinical episodes than those without antibodies to them.

                 

                2018-10-08 17:15 UTC
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