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      Dealing with missing standard deviation and mean values in meta-analysis of continuous outcomes: a systematic review

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          Abstract

          Background

          Rigorous, informative meta-analyses rely on availability of appropriate summary statistics or individual participant data. For continuous outcomes, especially those with naturally skewed distributions, summary information on the mean or variability often goes unreported. While full reporting of original trial data is the ideal, we sought to identify methods for handling unreported mean or variability summary statistics in meta-analysis.

          Methods

          We undertook two systematic literature reviews to identify methodological approaches used to deal with missing mean or variability summary statistics. Five electronic databases were searched, in addition to the Cochrane Colloquium abstract books and the Cochrane Statistics Methods Group mailing list archive. We also conducted cited reference searching and emailed topic experts to identify recent methodological developments. Details recorded included the description of the method, the information required to implement the method, any underlying assumptions and whether the method could be readily applied in standard statistical software. We provided a summary description of the methods identified, illustrating selected methods in example meta-analysis scenarios.

          Results

          For missing standard deviations (SDs), following screening of 503 articles, fifteen methods were identified in addition to those reported in a previous review. These included Bayesian hierarchical modelling at the meta-analysis level; summary statistic level imputation based on observed SD values from other trials in the meta-analysis; a practical approximation based on the range; and algebraic estimation of the SD based on other summary statistics. Following screening of 1124 articles for methods estimating the mean, one approximate Bayesian computation approach and three papers based on alternative summary statistics were identified. Illustrative meta-analyses showed that when replacing a missing SD the approximation using the range minimised loss of precision and generally performed better than omitting trials. When estimating missing means, a formula using the median, lower quartile and upper quartile performed best in preserving the precision of the meta-analysis findings, although in some scenarios, omitting trials gave superior results.

          Conclusions

          Methods based on summary statistics (minimum, maximum, lower quartile, upper quartile, median) reported in the literature facilitate more comprehensive inclusion of randomised controlled trials with missing mean or variability summary statistics within meta-analyses.

          Electronic supplementary material

          The online version of this article (10.1186/s12874-018-0483-0) contains supplementary material, which is available to authorized users.

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          Most cited references16

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          Systematic Review of the Empirical Evidence of Study Publication Bias and Outcome Reporting Bias

          Background The increased use of meta-analysis in systematic reviews of healthcare interventions has highlighted several types of bias that can arise during the completion of a randomised controlled trial. Study publication bias has been recognised as a potential threat to the validity of meta-analysis and can make the readily available evidence unreliable for decision making. Until recently, outcome reporting bias has received less attention. Methodology/Principal Findings We review and summarise the evidence from a series of cohort studies that have assessed study publication bias and outcome reporting bias in randomised controlled trials. Sixteen studies were eligible of which only two followed the cohort all the way through from protocol approval to information regarding publication of outcomes. Eleven of the studies investigated study publication bias and five investigated outcome reporting bias. Three studies have found that statistically significant outcomes had a higher odds of being fully reported compared to non-significant outcomes (range of odds ratios: 2.2 to 4.7). In comparing trial publications to protocols, we found that 40–62% of studies had at least one primary outcome that was changed, introduced, or omitted. We decided not to undertake meta-analysis due to the differences between studies. Conclusions Recent work provides direct empirical evidence for the existence of study publication bias and outcome reporting bias. There is strong evidence of an association between significant results and publication; studies that report positive or significant results are more likely to be published and outcomes that are statistically significant have higher odds of being fully reported. Publications have been found to be inconsistent with their protocols. Researchers need to be aware of the problems of both types of bias and efforts should be concentrated on improving the reporting of trials.
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            PyMC: Bayesian Stochastic Modelling in Python.

            This user guide describes a Python package, PyMC, that allows users to efficiently code a probabilistic model and draw samples from its posterior distribution using Markov chain Monte Carlo techniques.
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              • Article: not found

              :{unav)

              Statistics and Computing, 10(4), 325-337

                Author and article information

                Contributors
                Christopher.Weir@ed.ac.uk
                dributcheruofed@gmail.com
                Valentina.Assi@ed.ac.uk
                Steff.Lewis@ed.ac.uk
                Gordon.Murray@ed.ac.uk
                Peter.Langhorne@glasgow.ac.uk
                M.Brady@gcu.ac.uk
                Journal
                BMC Med Res Methodol
                BMC Med Res Methodol
                BMC Medical Research Methodology
                BioMed Central (London )
                1471-2288
                7 March 2018
                7 March 2018
                2018
                : 18
                : 25
                Affiliations
                [1 ]ISNI 0000 0004 1936 7988, GRID grid.4305.2, Usher Institute of Population Health Sciences and Informatics, , University of Edinburgh, ; Edinburgh, UK
                [2 ]ISNI 0000 0001 2193 314X, GRID grid.8756.c, Institute of Cardiovascular and Medical Sciences, , University of Glasgow, ; Glasgow, UK
                [3 ]ISNI 0000 0001 0669 8188, GRID grid.5214.2, Nursing, Midwifery and Allied Health Professions Research Unit, , Glasgow Caledonian University, ; Glasgow, UK
                Article
                483
                10.1186/s12874-018-0483-0
                5842611
                29514597
                d9db219d-94a1-46e5-bd9c-3c1e7fcd8ea3
                © The Author(s). 2018

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 6 September 2017
                : 20 February 2018
                Funding
                Funded by: FundRef http://dx.doi.org/10.13039/501100000364, Stroke Association;
                Award ID: 2012/05
                Award Recipient :
                Funded by: FundRef http://dx.doi.org/10.13039/501100000833, Rosetrees Trust;
                Award ID: M322
                Award Recipient :
                Funded by: NHS Lothian
                Funded by: FundRef http://dx.doi.org/10.13039/501100000589, Chief Scientist Office;
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2018

                Medicine
                continuous outcomes,meta-analysis,systematic review,missing mean,missing standard deviation

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