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      Mapping Africa’s Biodiversity: More of the Same Is Just Not Good Enough

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          Abstract

          Species distribution data are fundamental to the understanding of biodiversity patterns and processes. Yet, such data are strongly affected by sampling biases, mostly related to site accessibility. The understanding of these biases is therefore crucial in systematics, biogeography, and conservation. Here we present a novel approach for quantifying sampling effort and its impact on biodiversity knowledge, focusing on Africa. In contrast to previous studies assessing sampling completeness (percentage of species recorded in relation to predicted), we investigate whether the lack of knowledge of a site attracts scientists to visit these areas and collect samples of species. We then estimate the time required to sample 90% of the continent under a Weibull distributed biodiversity sampling rate and the number of sampling events required to record \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{upgreek} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} }{}$ \ge $\end{document} 50% of the species. Using linear and spatial regression models, we show that previous sampling has been strongly influencing the resampling of areas, attracting repeated visits. This bias has existed for over two centuries, has increased in recent decades, and is most pronounced among mammals. It may take between 172 and 274 years, depending on the group, to achieve at least one sampling event per grid cell in the entire continent. Just one visit will, however, not be enough: in order to record \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{upgreek} \usepackage{mathrsfs} \setlength{\oddsidemargin}{-69pt} \begin{document} }{}$ \ge $\end{document} 50% of the current diversity, it will require at least 12 sampling events for amphibians, 13 for mammals, and 27 for birds. Our results demonstrate the importance of sampling areas that lack primary biodiversity data and the urgency with which this needs to be done. Current practice is insufficient to adequately classify and map African biodiversity; it can lead to incorrect conclusions being drawn from biogeographic analyses and can result in misleading and self-reinforcing conservation priorities. [Amphibians; birds; mammals; sampling bias; sampling gaps; Wallacean shortfall.]

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          WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

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            Simple Features for R: Standardized Support for Spatial Vector Data

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              The effect of malaria control on Plasmodium falciparum in Africa between 2000 and 2015

              Since the year 2000, a concerted campaign against malaria has led to unprecedented levels of intervention coverage across sub-Saharan Africa. Understanding the effect of this control effort is vital to inform future control planning. However, the effect of malaria interventions across the varied epidemiological settings of Africa remains poorly understood owing to the absence of reliable surveillance data and the simplistic approaches underlying current disease estimates. Here we link a large database of malaria field surveys with detailed reconstructions of changing intervention coverage to directly evaluate trends from 2000 to 2015 and quantify the attributable effect of malaria disease control efforts. We found that Plasmodium falciparum infection prevalence in endemic Africa halved and the incidence of clinical disease fell by 40% between 2000 and 2015. We estimate that interventions have averted 663 (542–753 credible interval) million clinical cases since 2000. Insecticide-treated nets, the most widespread intervention, were by far the largest contributor (68% of cases averted). Although still below target levels, current malaria interventions have substantially reduced malaria disease incidence across the continent. Increasing access to these interventions, and maintaining their effectiveness in the face of insecticide and drug resistance, should form a cornerstone of post-2015 control strategies.
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                Author and article information

                Contributors
                Role: Associate Editor
                Journal
                Syst Biol
                Syst Biol
                sysbio
                Systematic Biology
                Oxford University Press
                1063-5157
                1076-836X
                May 2021
                11 December 2020
                11 December 2020
                : 70
                : 3
                : 623-633
                Affiliations
                [1 ] Gothenburg Global Biodiversity Centre , Box 461, 405 30 Gothenburg, Sweden1
                [2 ] Department of Biological and Environmental Sciences, University of Gothenburg , Box 461, 405 30 Gothenburg, Sweden
                [3 ] Departamento de Biologia e CESAM, Universidade de Aveiro, Campus Universitário de Santiago , 3810-193 Aveiro, Portugal
                [4 ] Faculty of Natural Sciences at Lúrio University, Campus universitário da Universidade Lúrio, Bairro Eduardo Mondlane , 3200, Pemba, Cabo Delgado, Moçambique
                [5 ] Coordenação de Pesquisa em Biodiversidade, Instituto Nacional de Pesquisas da Amazônia (INPA) , Caixa Postal 2223, CEP 69008-971, Manaus, Brazil
                [6 ] Royal Botanic Gardens , Kew, Richmond, Surrey TW9 3AE, U.K
                Author notes
                Correspondence to be sent to: Gothenburg Global Biodiversity Centre, Göteborg, Sweden; E-mail: harithmorgadinho@ 123456gmail.com .

                Alexandre Antonelli and Søren Faurby contributed equally to this work

                Article
                syaa090
                10.1093/sysbio/syaa090
                8048386
                33306123
                dba1fbe8-c6bb-48b4-be8d-db531400f05e
                © The Author(s) 2020. Published by Oxford University Press, on behalf of the Society of Systematic Biologists.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 11 February 2020
                : 14 November 2020
                : 19 November 2020
                Page count
                Pages: 14
                Funding
                Funded by: CESAM, DOI 10.13039/100013239;
                Award ID: UIDP/50017/2020+UIDB/50017/2020
                Funded by: FCT/MCTES;
                Funded by: Christensen Conservation Leaders Scholarship;
                Funded by: World Wildlife Foundation—Education for Nature Scholarship;
                Funded by: FCT/MCTES;
                Award ID: PD/BD/128123/2016
                Funded by: CAPES, DOI 10.13039/501100002322;
                Award ID: #001292/2015-03
                Funded by: Instituto Serrapilheira, DOI 10.13039/501100013275;
                Funded by: Swedish Research Council, DOI 10.13039/501100004359;
                Award ID: #2017-03862
                Funded by: Swedish Research Council, DOI 10.13039/501100004359;
                Funded by: Swedish Foundation for Strategic Research, DOI 10.13039/501100001729;
                Funded by: Knut and Alice Wallenberg Foundation, DOI 10.13039/501100004063;
                Funded by: Wallenberg Academy Fellowship;
                Funded by: Royal Botanic Gardens;
                Categories
                Point of View
                AcademicSubjects/SCI01130

                Animal science & Zoology
                Animal science & Zoology

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