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      Multiple Pathways for Protein Transport to Peroxisomes

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          Abstract

          Peroxisomes are unique among the organelles of the endomembrane system. Unlike other organelles that derive most if not all of their proteins from the ER ( endoplasmic reticulum), peroxisomes contain dedicated machineries for import of matrix proteins and insertion of membrane proteins. However, peroxisomes are also able to import a subset of their membrane proteins from the ER. One aspect of peroxisome biology that has remained ill defined is the role the various import pathways play in peroxisome maintenance. In this review, we discuss the available data on matrix and membrane protein import into peroxisomes.

          Graphical Abstract

          Highlights

          • Peroxisomal membrane and matrix proteins require distinct factors for their transport.

          • Matrix proteins fold in the cytosol prior to their import.

          • Loaded targeting receptors form part of the matrix protein translocation pore.

          • Many membrane proteins are directly inserted into the peroxisomal membrane.

          • Some peroxisomal membrane proteins are transported via the ER to peroxisomes.

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          Most cited references182

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          A conserved tripeptide sorts proteins to peroxisomes

          The firefly luciferase protein contains a peroxisomal targeting signal at its extreme COOH terminus (Gould et al., 1987). Site-directed mutagenesis of the luciferase gene reveals that this peroxisomal targeting signal consists of the COOH-terminal three amino acids of the protein, serine-lysine-leucine. When this tripeptide is appended to the COOH terminus of a cytosolic protein (chloramphenicol acetyltransferase), it is sufficient to direct the fusion protein into peroxisomes. Additional mutagenesis experiments reveal that only a limited number of conservative changes can be made in this tripeptide targeting signal without abolishing its activity. These results indicate that peroxisomal protein import, unlike other types of transmembrane translocation, is dependent upon a conserved amino acid sequence.
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            Identification of a targeting factor for posttranslational membrane protein insertion into the ER.

            Hundreds of proteins are anchored in intracellular membranes by a single transmembrane domain (TMD) close to the C terminus. Although these tail-anchored (TA) proteins serve numerous essential roles in cells, components of their targeting and insertion pathways have long remained elusive. Here we reveal a cytosolic TMD recognition complex (TRC) that targets TA proteins for insertion into the ER membrane. The highly conserved, 40 kDa ATPase subunit of TRC (which we termed TRC40) was identified as Asna-1. TRC40/Asna-1 interacts posttranslationally with TA proteins in a TMD-dependent manner for delivery to a proteinaceous receptor at the ER membrane. Subsequent release from TRC40/Asna-1 and insertion into the membrane depends on ATP hydrolysis. Consequently, an ATPase-deficient mutant of TRC40/Asna-1 dominantly inhibited TA protein insertion selectively without influencing other translocation pathways. Thus, TRC40/Asna-1 represents an integral component of a posttranslational pathway of membrane protein insertion whose targeting is mediated by TRC.
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              Contribution of the endoplasmic reticulum to peroxisome formation.

              How peroxisomes are formed in eukaryotic cells is unknown but important for insight into a variety of diseases. Both human and yeast cells lacking peroxisomes due to mutations in PEX3 or PEX19 genes regenerate the organelles upon reintroduction of the corresponding wild-type version. To evaluate how and from where new peroxisomes are formed, we followed the trafficking route of newly made YFP-tagged Pex3 and Pex19 proteins by real-time fluorescence microscopy in Saccharomyces cerevisiae. Remarkably, Pex3 (an integral membrane protein) could first be observed in the endoplasmic reticulum (ER), where it concentrates in foci that then bud off in a Pex19-dependent manner and mature into fully functional peroxisomes. Pex19 (a farnesylated, mostly cytosolic protein) enriches first at the Pex3 foci on the ER and then on the maturing peroxisomes. This trafficking route of Pex3-YFP is the same in wild-type cells. These results demonstrate that peroxisomes are generated from domains in the ER.
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                Author and article information

                Contributors
                Journal
                J Mol Biol
                J. Mol. Biol
                Journal of Molecular Biology
                Elsevier
                0022-2836
                1089-8638
                27 March 2015
                27 March 2015
                : 427
                : 6
                : 1176-1190
                Affiliations
                [1 ]Program in Cell Biology, Hospital for Sick Children, Toronto, ON, Canada M5G 1X8
                [2 ]Department of Biochemistry, University of Toronto, Toronto, ON, Canada M5S 1A8
                [3 ]Department of Molecular Biology and Biotechnology, University of Sheffield, Firth Court, Western Bank, Sheffield, South Yorkshire S10 2TN, United Kingdom
                Author notes
                [* ]Corresponding author. e.hettema@ 123456sheffield.ac.uk
                Article
                S0022-2836(15)00099-6
                10.1016/j.jmb.2015.02.005
                4726662
                25681696
                dc53897b-25cf-4e51-b46d-f23fa6d1e069
                © 2015 The Authors. Published by Elsevier Ltd.

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 1 August 2014
                : 5 February 2015
                : 6 February 2015
                Categories
                Review

                Molecular biology
                pmp, peroxisomal membrane protein,pts, peroxisomal targeting signal,ta, tail-anchored,peroxisome,peroxin,protein import

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