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      Microfluidic-Based Nucleic Acid Amplification Systems in Microbiology

      review-article
      1 , 2 , 2 , 1 , *
      Micromachines
      MDPI
      bacterial nucleic acid, microfluidic, PCR, LAMP, droplet

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          Abstract

          Rapid, sensitive, and selective bacterial detection is a hot topic, because the progress in this research area has had a broad range of applications. Novel and innovative strategies for detection and identification of bacterial nucleic acids are important for practical applications. Microfluidics is an emerging technology that only requires small amounts of liquid samples. Microfluidic devices allow for rapid advances in microbiology, enabling access to methods of amplifying nucleic acid molecules and overcoming difficulties faced by conventional. In this review, we summarize the recent progress in microfluidics-based polymerase chain reaction devices for the detection of nucleic acid biomarkers. The paper also discusses the recent development of isothermal nucleic acid amplification and droplet-based microfluidics devices. We discuss recent microfluidic techniques for sample preparation prior to the amplification process.

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          Most cited references205

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          Formation of dispersions using “flow focusing” in microchannels

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            Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation.

            The loop-mediated isothermal amplification (LAMP) is a novel nucleic acid amplification method that uses only one type of enzyme. One of the characteristics of the LAMP method is its ability to synthesize extremely large amount of DNA. Accordingly, a large amount of by-product, pyrophosphate ion, is produced, yielding white precipitate of magnesium pyrophosphate in the reaction mixture. Judging the presence or absence of this white precipitate allows easy distinction of whether nucleic acid was amplified by the LAMP method. Since an increase in the turbidity of the reaction mixture according to the production of precipitate correlates with the amount of DNA synthesized, real-time monitoring of the LAMP reaction was achieved by real-time measurement of turbidity. Copyright 2001 Academic Press.
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              Miniaturized total chemical analysis systems: A novel concept for chemical sensing

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                Author and article information

                Journal
                Micromachines (Basel)
                Micromachines (Basel)
                micromachines
                Micromachines
                MDPI
                2072-666X
                19 June 2019
                June 2019
                : 10
                : 6
                : 408
                Affiliations
                [1 ]Queensland Micro- and Nanotechnology Centre, Nathan Campus, Griffith University, 170 Kessels Road, Brisbane QLD 4111, Australia; lena.gorgannezhad@ 123456griffithuni.edu.au
                [2 ]School of Environment and Science, Nathan Campus, Griffith University, 170 Kessels Road, Brisbane QLD 4111, Australia; h.stratton@ 123456griffith.edu.au
                Author notes
                Author information
                https://orcid.org/0000-0003-3626-5361
                Article
                micromachines-10-00408
                10.3390/mi10060408
                6630468
                31248141
                dd747803-f8c7-4b52-8fce-740fcb232502
                © 2019 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 27 May 2019
                : 17 June 2019
                Categories
                Review

                bacterial nucleic acid,microfluidic,pcr,lamp,droplet
                bacterial nucleic acid, microfluidic, pcr, lamp, droplet

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