14
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Chronic Dicer1 deficiency promotes atrophic and neovascular outer retinal pathologies in mice

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Significance

          DICER1 processes micro-RNAs into their bioactive forms and metabolizes RNAs from short interspersed nuclear element genetic repeats, principally Alu RNAs in humans. DICER1 deficiency is implicated in retinal pigmented epithelium (RPE) degeneration in atrophic age-related macular degeneration (AMD). Here, we report that three independent mouse models of DICER1 deficiency develop RPE degeneration and aberrant choroidal and retinal neovascularization (CRNV), both hallmarks of advanced AMD. These pathologies were dependent on inflammatory caspases 1 and 11 and the signaling adaptor MyD88. We observed reduced DICER1 abundance in a separate model of spontaneous CRNV and developed an adenoassociated vector-mediated DICER1 delivery construct, which reduced the severity of established spontaneous CRNV. Thus, persistent deficiency in DICER1 results in RPE degeneration and CRNV.

          Abstract

          Degeneration of the retinal pigmented epithelium (RPE) and aberrant blood vessel growth in the eye are advanced-stage processes in blinding diseases such as age-related macular degeneration (AMD), which affect hundreds of millions of people worldwide. Loss of the RNase DICER1, an essential factor in micro-RNA biogenesis, is implicated in RPE atrophy. However, the functional implications of DICER1 loss in choroidal and retinal neovascularization are unknown. Here, we report that two independent hypomorphic mouse strains, as well as a separate model of postnatal RPE-specific DICER1 ablation, all presented with spontaneous RPE degeneration and choroidal and retinal neovascularization. DICER1 hypomorphic mice lacking critical inflammasome components or the innate immune adaptor MyD88 developed less severe RPE atrophy and pathological neovascularization. DICER1 abundance was also reduced in retinas of the JR5558 mouse model of spontaneous choroidal neovascularization. Finally, adenoassociated vector-mediated gene delivery of a truncated DICER1 variant (OptiDicer) reduced spontaneous choroidal neovascularization in JR5558 mice. Collectively, these findings significantly expand the repertoire of DICER1 in preserving retinal homeostasis by preventing both RPE degeneration and pathological neovascularization.

          Related collections

          Most cited references70

          • Record: found
          • Abstract: found
          • Article: found
          Is Open Access

          miRDB: an online resource for microRNA target prediction and functional annotations

          MicroRNAs (miRNAs) are small non-coding RNAs that are extensively involved in many physiological and disease processes. One major challenge in miRNA studies is the identification of genes regulated by miRNAs. To this end, we have developed an online resource, miRDB (http://mirdb.org), for miRNA target prediction and functional annotations. Here, we describe recently updated features of miRDB, including 2.1 million predicted gene targets regulated by 6709 miRNAs. In addition to presenting precompiled prediction data, a new feature is the web server interface that allows submission of user-provided sequences for miRNA target prediction. In this way, users have the flexibility to study any custom miRNAs or target genes of interest. Another major update of miRDB is related to functional miRNA annotations. Although thousands of miRNAs have been identified, many of the reported miRNAs are not likely to play active functional roles or may even have been falsely identified as miRNAs from high-throughput studies. To address this issue, we have performed combined computational analyses and literature mining, and identified 568 and 452 functional miRNAs in humans and mice, respectively. These miRNAs, as well as associated functional annotations, are presented in the FuncMir Collection in miRDB.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Dicer is essential for mouse development.

            To address the biological function of RNA interference (RNAi)-related pathways in mammals, we disrupted the gene Dicer1 in mice. Loss of Dicer1 lead to lethality early in development, with Dicer1-null embryos depleted of stem cells. Coupled with our inability to generate viable Dicer1-null embryonic stem (ES) cells, this suggests a role for Dicer, and, by implication, the RNAi machinery, in maintaining the stem cell population during early mouse development.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              miRDB: a microRNA target prediction and functional annotation database with a wiki interface.

              MicroRNAs (miRNAs) are short noncoding RNAs that are involved in the regulation of thousands of gene targets. Recent studies indicate that miRNAs are likely to be master regulators of many important biological processes. Due to their functional importance, miRNAs are under intense study at present, and many studies have been published in recent years on miRNA functional characterization. The rapid accumulation of miRNA knowledge makes it challenging to properly organize and present miRNA function data. Although several miRNA functional databases have been developed recently, this remains a major bioinformatics challenge to miRNA research community. Here, we describe a new online database system, miRDB, on miRNA target prediction and functional annotation. Flexible web search interface was developed for the retrieval of target prediction results, which were generated with a new bioinformatics algorithm we developed recently. Unlike most other miRNA databases, miRNA functional annotations in miRDB are presented with a primary focus on mature miRNAs, which are the functional carriers of miRNA-mediated gene expression regulation. In addition, a wiki editing interface was established to allow anyone with Internet access to make contributions on miRNA functional annotation. This is a new attempt to develop an interactive community-annotated miRNA functional catalog. All data stored in miRDB are freely accessible at http://mirdb.org.
                Bookmark

                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                4 February 2020
                21 January 2020
                21 January 2020
                : 117
                : 5
                : 2579-2587
                Affiliations
                [1] aDepartment of Ophthalmology and Visual Sciences, University of Kentucky , Lexington, KY 40506;
                [2] bDepartment of Ophthalmology, Loma Linda University , Loma Linda, CA 92350;
                [3] cCenter for Advanced Vision Science, University of Virginia School of Medicine , Charlottesville, VA 22903;
                [4] dDepartment of Ophthalmology, University of Virginia School of Medicine , Charlottesville, VA 22903;
                [5] eMolecular and Cellular Basis of Disease Graduate Program, University of Virginia School of Medicine , Charlottesville, VA 22903;
                [6] fDepartamento de Oftalmologia e Ciências Visuais, Escola Paulista de Medicina, Universidade Federal de São Paulo , São Paulo 04039-032, Brazil;
                [7] gAravind Medical Research Foundation, Aravind Eye Care System , Madurai, Tamil Nadu 625020, India;
                [8] hDepartment of Ophthalmology, University of Tsukuba , Ibaraki 305-8575, Japan;
                [9] iLaboratoire d’ImmunoRhumatologie Moléculaire, INSERM UMR-S1109, LabEx Transplantex, Fédération de Médecine Translationnelle de Strasbourg, Université de Strasbourg , 67085 Strasbourg, France;
                [10] jFédération Hospitalo-Universitaire OMICARE, Université de Strasbourg , 67085 Strasbourg, France;
                [11] kLaboratory of Genome Science, Biosignal Genome Resource Center, Institute for Molecular and Cellular Regulation, Gunma University , Maebashi 371-8512, Japan;
                [12] lThe Jackson Laboratory , Bar Harbor, ME 04609;
                [13] mDepartment of Pathology, University of Virginia School of Medicine , Charlottesville, VA 22903;
                [14] nDepartment of Microbiology, Immunology, and Cancer Biology, University of Virginia School of Medicine , Charlottesville, VA 22903;
                [15] oDepartment of Biomedical Engineering, University of Virginia School of Engineering , Charlottesville, VA 22904
                Author notes
                2To whom correspondence may be addressed. Email: gelfand@ 123456virginia.edu .

                Edited by Jeremy Nathans, Johns Hopkins University School of Medicine, Baltimore, MD, and approved December 19, 2019 (received for review July 8, 2019)

                Author contributions: C.B.W., H.U., Y.K., T.Y., R.Y., S.H., R.D.M., I.A., F.P., Y.N., S.N., S.F., R.A., B.J.F., A.B.-C., N.K., B.K.A., J.A., and B.D.G. designed research; C.B.W., H.U., Y.K., T.Y., R.Y., S.H., R.D.M., I.A., F.P., Y.N., S.N., S.F., R.A., A.B.-C., B.K.A., and B.D.G. performed research; H.U., P.G., I.H., B.C., B.K.A., and B.D.G. contributed new reagents/analytic tools; C.B.W., H.U., Y.K., T.Y., R.Y., S.H., R.D.M., I.A., F.P., Y.N., S.N., S.F., R.A., B.J.F., A.B.-C., N.K., B.K.A., J.A., and B.D.G. analyzed data; and C.B.W., H.U., B.K.A., J.A., and B.D.G. wrote the paper.

                1C.B.W. and H.U. contributed equally to this work.

                3Present address: OliX Pharmaceuticals, Inc., Suwon-Si, Gyeonggi-do 16226, Korea.

                4Present address: Vistar Eye Center, Roanoke, VA 24019.

                Author information
                http://orcid.org/0000-0001-6853-7080
                http://orcid.org/0000-0003-4619-9409
                Article
                201909761
                10.1073/pnas.1909761117
                7007521
                31964819
                e2223aad-a089-4c1b-871b-b0d507dc761f
                Copyright © 2020 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                Page count
                Pages: 9
                Funding
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY028027
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: American Heart Association (AHA) 100000968
                Award ID: 13SDG16770008
                Award Recipient : Bradley D Gelfand
                Funded by: HHS | National Institutes of Health (NIH) 100000002
                Award ID: DP1GM114862
                Award Recipient : Ryan D Makin Award Recipient : Jayakrishna Ambati
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY022238
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY024068
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY029799
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: John Templeton Foundation (JTF) 100000925
                Award ID: 60763
                Award Recipient : Jayakrishna Ambati
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: K99EY024336
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R00EY024336
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: HHS | National Institutes of Health (NIH) 100000002
                Award ID: T32 HL007284
                Award Recipient : Ryan D Makin Award Recipient : Jayakrishna Ambati
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY017950
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Funded by: HHS | NIH | National Eye Institute (NEI) 100000053
                Award ID: R01EY017182
                Award Recipient : Hironori Uehara Award Recipient : Nagaraj Kerur Award Recipient : Balamurali K. Ambati Award Recipient : Jayakrishna Ambati Award Recipient : Bradley D Gelfand
                Categories
                Biological Sciences
                Medical Sciences

                dicer,retina,inflammasome,choroidal neovascularization
                dicer, retina, inflammasome, choroidal neovascularization

                Comments

                Comment on this article