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      Implication of the VRK1 chromatin kinase in the signaling responses to DNA damage: a therapeutic target?

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          Abstract

          DNA damage causes a local distortion of chromatin that triggers the sequential processes that participate in specific DNA repair mechanisms. This initiation of the repair response requires the involvement of a protein whose activity can be regulated by histones. Kinases are candidates to regulate and coordinate the connection between a locally altered chromatin and the response initiating signals that lead to identification of the type of lesion and the sequential steps required in specific DNA damage responses (DDR). This initiating kinase must be located in chromatin, and be activated independently of the type of DNA damage. We review the contribution of the Ser-Thr vaccinia-related kinase 1 (VRK1) chromatin kinase as a new player in the signaling of DNA damage responses, at chromatin and cellular levels, and its potential as a new therapeutic target in oncology. VRK1 is involved in the regulation of histone modifications, such as histone phosphorylation and acetylation, and in the formation of γH2AX, NBS1 and 53BP1 foci induced in DDR. Induction of DNA damage by chemotherapy or radiation is a mainstay of cancer treatment. Therefore, novel treatments can be targeted to proteins implicated in the regulation of DDR, rather than by directly causing DNA damage.

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          Most cited references104

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          The protein kinase complement of the human genome.

          G. Manning (2002)
          We have catalogued the protein kinase complement of the human genome (the "kinome") using public and proprietary genomic, complementary DNA, and expressed sequence tag (EST) sequences. This provides a starting point for comprehensive analysis of protein phosphorylation in normal and disease states, as well as a detailed view of the current state of human genome analysis through a focus on one large gene family. We identify 518 putative protein kinase genes, of which 71 have not previously been reported or described as kinases, and we extend or correct the protein sequences of 56 more kinases. New genes include members of well-studied families as well as previously unidentified families, some of which are conserved in model organisms. Classification and comparison with model organism kinomes identified orthologous groups and highlighted expansions specific to human and other lineages. We also identified 106 protein kinase pseudogenes. Chromosomal mapping revealed several small clusters of kinase genes and revealed that 244 kinases map to disease loci or cancer amplicons.
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            Cancer etiology. Variation in cancer risk among tissues can be explained by the number of stem cell divisions.

            Some tissue types give rise to human cancers millions of times more often than other tissue types. Although this has been recognized for more than a century, it has never been explained. Here, we show that the lifetime risk of cancers of many different types is strongly correlated (0.81) with the total number of divisions of the normal self-renewing cells maintaining that tissue's homeostasis. These results suggest that only a third of the variation in cancer risk among tissues is attributable to environmental factors or inherited predispositions. The majority is due to "bad luck," that is, random mutations arising during DNA replication in normal, noncancerous stem cells. This is important not only for understanding the disease but also for designing strategies to limit the mortality it causes. Copyright © 2015, American Association for the Advancement of Science.
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              Histone H4-K16 acetylation controls chromatin structure and protein interactions.

              Acetylation of histone H4 on lysine 16 (H4-K16Ac) is a prevalent and reversible posttranslational chromatin modification in eukaryotes. To characterize the structural and functional role of this mark, we used a native chemical ligation strategy to generate histone H4 that was homogeneously acetylated at K16. The incorporation of this modified histone into nucleosomal arrays inhibits the formation of compact 30-nanometer-like fibers and impedes the ability of chromatin to form cross-fiber interactions. H4-K16Ac also inhibits the ability of the adenosine triphosphate-utilizing chromatin assembly and remodeling enzyme ACF to mobilize a mononucleosome, indicating that this single histone modification modulates both higher order chromatin structure and functional interactions between a nonhistone protein and the chromatin fiber.
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                Author and article information

                Contributors
                pedro.lazo@csic.es
                Journal
                Cell Mol Life Sci
                Cell. Mol. Life Sci
                Cellular and Molecular Life Sciences
                Springer International Publishing (Cham )
                1420-682X
                1420-9071
                20 April 2018
                20 April 2018
                2018
                : 75
                : 13
                : 2375-2388
                Affiliations
                [1 ]ISNI 0000 0001 2180 1817, GRID grid.11762.33, Experimental Therapeutics and Translational Oncology Program, Instituto de Biología Molecular y Celular del Cáncer, , CSIC-Universidad de Salamanca, ; 37007 Salamanca, Spain
                [2 ]GRID grid.411258.b, Instituto de Investigación Biomédica de Salamanca (IBSAL), , Hospital Universitario de Salamanca, ; 37007 Salamanca, Spain
                Author information
                http://orcid.org/0000-0002-7657-7127
                http://orcid.org/0000-0001-8997-3025
                Article
                2811
                10.1007/s00018-018-2811-2
                5986855
                29679095
                e40107c8-b262-4587-a890-03bd79524a78
                © The Author(s) 2018

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.

                History
                : 5 February 2018
                : 14 March 2018
                : 3 April 2018
                Funding
                Funded by: MINECO, Agencia Estatal de Investigación
                Award ID: SAF2016-75744-R
                Award Recipient :
                Funded by: MINECO, Agencia Estatal de Investigación (ES)
                Award ID: MINECO predoctoral contract FPI: BES-2014-067721
                Award Recipient :
                Categories
                Review
                Custom metadata
                © Springer International Publishing AG, part of Springer Nature 2018

                Molecular biology
                vrk1,h2ax,nbs1,53bp1,p53,phosphorylation,dna damage response,ionizing radiation
                Molecular biology
                vrk1, h2ax, nbs1, 53bp1, p53, phosphorylation, dna damage response, ionizing radiation

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