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      In situ estimation of genetic variation of functional and ecological traits in Quercus petraea and Q.robur

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          Abstract

          background

          Predicting the evolutionary potential of natural tree populations requires the estimation of heritability and genetic correlations among traits on which selection acts, as differences in evolutionary success between species may rely on differences for these genetic parameters. In situ estimates are expected to be more accurate than measures done under controlled conditions which do not reflect the natural environmental variance.

          aims

          The aim of the current study was to estimate three genetic parameters (i.e. heritability, evolvability and genetic correlations) in a natural mixed oak stand composed of Quercus petraea and Quercus robur about 100 years old, for 58 traits of ecological and functional relevance (growth, reproduction, phenology, physiology, resilience, structure, morphology and defence).

          methods

          First we estimated genetic parameters directly in situ using realized genomic relatedness of adult trees and parentage relationships over two generations to estimate the traits additive variance. Secondly, we benefited from existing ex situ experiments (progeny tests and conservation collection) installed with the same populations, thus allowing comparisons of in situ heritability estimates with more traditional methods.

          results

          Heritability and evolvability estimates obtained with different methods varied substantially and showed large confidence intervals, however we found that in situ were less precise than ex situ estimates, and assessments over two generations (with deeper relatedness) improved estimates of heritability while large sampling sizes are needed for accurate estimations. At the biological level, heritability values varied moderately across different ecological and functional categories of traits, and genetic correlations among traits were conserved over the two species.

          conclusion

          We identified limits for using realized genomic relatedness in natural stands to estimate the genetic variance, given the overall low variance of genetic relatedness and the rather low sampling sizes of currently used long term genetic plots in forestry. These limits can be overcome if larger sample sizes are considered, or if the approach is extended over the next generation.

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          Author and article information

          Journal
          101258583
          Tree Genet. Genomes
          Tree genetics & genomes
          1614-2942
          1614-2950
          02 March 2020
          28 February 2020
          28 August 2020
          : 16
          : 32
          Affiliations
          [1 ]BIOGECO, INRA, Univ. Bordeaux, 33610 Cestas, France
          [2 ]UMR SILVA, INRA, 54280 Champenoux, France
          [3 ]PIAF, Univ. Clermont-Auvergne, INRA, 63000 Clermont-Ferrand, France
          [4 ]URP3F, INRA, 86600 Lusignan, France
          [5 ]BIOFORA, INRA, ONF, CS 40001 Ardon 45075 Orléans Cedex 2, France
          Author notes
          Correspondence: Antoine Kremer, antoine.kremer@ 123456inra.fr , Tel: +33 5 57 12 28 32
          Article
          PMC7136077 PMC7136077 7136077 ems85946
          10.1007/s11295-019-1407-9
          7136077
          32256274
          e5d88e75-c328-4805-8591-4d314887c2e7
          History
          Categories
          Article

          Heritability,genetic correlation,tree,natural population,genomic relatedness,evolvability

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