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      LOW PHOTOSYNTHETIC EFFICIENCY 1 is required for light-regulated photosystem II biogenesis in Arabidopsis

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          Photosystem II (PSII) reaction center protein D1 is encoded by chloroplast gene psbA and is crucial to the biogenesis and functional maintenance of PSII. D1 proteins are highly dynamic under varying light conditions and thus require efficient synthesis, but the mechanism remains poorly understood. We reported that Arabidopsis LPE1 directly binds to the 5′ UTR of psbA mRNA in a light-dependent manner through a redox-based mechanism and facilitates the association of HCF173 with psbA mRNA to regulate D1 translation. These findings fill a major gap in our understanding of the mechanism of light-regulated D1 synthesis in higher plants and imply that higher plants and primitive photosynthetic organisms share conserved mechanisms but use distinct regulators to regulate biogenesis of PSII subunits.

          Abstract

          Photosystem II (PSII), a multisubunit protein complex of the photosynthetic electron transport chain, functions as a water-plastoquinone oxidoreductase, which is vital to the initiation of photosynthesis and electron transport. Although the structure, composition, and function of PSII are well understood, the mechanism of PSII biogenesis remains largely elusive. Here, we identified a nuclear-encoded pentatricopeptide repeat (PPR) protein LOW PHOTOSYNTHETIC EFFICIENCY 1 (LPE1; encoded by At3g46610) in Arabidopsis, which plays a crucial role in PSII biogenesis. LPE1 is exclusively targeted to chloroplasts and directly binds to the 5′ UTR of psbA mRNA which encodes the PSII reaction center protein D1. The loss of LPE1 results in less efficient loading of ribosome on the psbA mRNA and great synthesis defects in D1 protein. We further found that LPE1 interacts with a known regulator of psbA mRNA translation HIGH CHLOROPHYLL FLUORESCENCE 173 (HCF173) and facilitates the association of HCF173 with psbA mRNA. More interestingly, our results indicate that LPE1 associates with psbA mRNA in a light-dependent manner through a redox-based mechanism. This study enhances our understanding of the mechanism of light-regulated D1 synthesis, providing important insight into PSII biogenesis and the functional maintenance of efficient photosynthesis in higher plants.

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          Most cited references44

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          Chlorophyll fluorescence--a practical guide.

          Chlorophyll fluorescence analysis has become one of the most powerful and widely used techniques available to plant physiologists and ecophysiologists. This review aims to provide an introduction for the novice into the methodology and applications of chlorophyll fluorescence. After a brief introduction into the theoretical background of the technique, the methodology and some of the technical pitfalls that can be encountered are explained. A selection of examples is then used to illustrate the types of information that fluorescence can provide.
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            New fluorescence parameters for the determination of q(a) redox state and excitation energy fluxes.

            A number of useful photosynthetic parameters are commonly derived from saturation pulse-induced fluorescence analysis. We show, that q(P), an estimate of the fraction of open centers, is based on a pure 'puddle' antenna model, where each Photosystem (PS) II center possesses its own independent antenna system. This parameter is incompatible with more realistic models of the photosynthetic unit, where reaction centers are connected by shared antenna, that is, the so-called 'lake' or 'connected units' models. We thus introduce a new parameter, q(L), based on a Stern-Volmer approach using a lake model, which estimates the fraction of open PS II centers. We suggest that q(L) should be a useful parameter for terrestrial plants consistent with a high connectivity of PS II units, whereas some marine species with distinct antenna architecture, may require the use of more complex parameters based on intermediate models of the photosynthetic unit. Another useful parameter calculated from fluorescence analysis is Phi(II), the yield of PS II. In contrast to q(L), we show that the Phi(II) parameter can be derived from either a pure 'lake' or pure 'puddle' model, and is thus likely to be a robust parameter. The energy absorbed by PS II is divided between the fraction used in photochemistry, Phi(II), and that lost non-photochemically. We introduce two additional parameters that can be used to estimate the flux of excitation energy into competing non-photochemical pathways, the yield induced by downregulatory processes, Phi(NPQ), and the yield for other energy losses, Phi(NO).
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              Pentatricopeptide repeat proteins in plants.

              Pentatricopeptide repeat (PPR) proteins constitute one of the largest protein families in land plants, with more than 400 members in most species. Over the past decade, much has been learned about the molecular functions of these proteins, where they act in the cell, and what physiological roles they play during plant growth and development. A typical PPR protein is targeted to mitochondria or chloroplasts, binds one or several organellar transcripts, and influences their expression by altering RNA sequence, turnover, processing, or translation. Their combined action has profound effects on organelle biogenesis and function and, consequently, on photosynthesis, respiration, plant development, and environmental responses. Recent breakthroughs in understanding how PPR proteins recognize RNA sequences through modular base-specific contacts will help match proteins to potential binding sites and provide a pathway toward designing synthetic RNA-binding proteins aimed at desired targets.
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                Author and article information

                Journal
                Proc Natl Acad Sci U S A
                Proc. Natl. Acad. Sci. U.S.A
                pnas
                pnas
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                26 June 2018
                11 June 2018
                11 June 2018
                : 115
                : 26
                : E6075-E6084
                Affiliations
                [1] aState Key Laboratory of Biocontrol, School of Life Sciences, Sun Yat-sen University , 510275 Guangzhou, People’s Republic of China;
                [2] bGuangdong Provincial Key Laboratory of Plant Resources, School of Life Sciences, Sun Yat-sen University , 510275 Guangzhou, People’s Republic of China;
                [3] cCollege of Life and Environmental Sciences, Shanghai Normal University , 200234 Shanghai, China
                Author notes
                2To whom correspondence should be addressed. Email: wanghb@ 123456mail.sysu.edu.cn .

                Edited by Krishna K. Niyogi, Howard Hughes Medical Institute and University of California, Berkeley, CA, and approved May 25, 2018 (received for review May 3, 2018)

                Author contributions: H.J. and H.-B.W. designed research; H.J., M.F., and Z.D. performed research; H.J., M.F., Z.D., S.D., M.L., X.D., B.L., D.F., J.W., L.P., and H.-B.W. analyzed data; and H.J. and H.-B.W. wrote the paper.

                1H.J., M.F., and Z.D. contributed equally to this work.

                Author information
                http://orcid.org/0000-0003-4957-0509
                Article
                201807364
                10.1073/pnas.1807364115
                6042084
                29891689
                e73fd94a-3d7b-4944-be90-c72fea75d0ad
                Copyright © 2018 the Author(s). Published by PNAS.

                This open access article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                Page count
                Pages: 10
                Funding
                Funded by: China National Funds for Distinguished Young Scientists 501100005153
                Award ID: 31425003
                Award Recipient : Hong-Bin Wang
                Funded by: National Natural Science Foundation of China (NSFC) 501100001809
                Award ID: 31770260
                Award Recipient : Honglei Jin
                Funded by: Ministry of Agriculture of the People's Republic of China (MOA) 501100004573
                Award ID: 2016ZX08009003-005-005
                Award Recipient : Hong-Bin Wang
                Funded by: National Natural Science Foundation of China (NSFC) 501100001809
                Award ID: 31500195
                Award Recipient : Honglei Jin
                Categories
                PNAS Plus
                Biological Sciences
                Plant Biology
                PNAS Plus

                chloroplast,photosynthesis,photosystem ii biogenesis,d1 synthesis,light regulation

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