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      Climate Cycles and Forecasts of Cutaneous Leishmaniasis, a Nonstationary Vector-Borne Disease

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      PLoS Medicine
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          Abstract

          Background

          Cutaneous leishmaniasis (CL) is one of the main emergent diseases in the Americas. As in other vector-transmitted diseases, its transmission is sensitive to the physical environment, but no study has addressed the nonstationary nature of such relationships or the interannual patterns of cycling of the disease.

          Methods and Findings

          We studied monthly data, spanning from 1991 to 2001, of CL incidence in Costa Rica using several approaches for nonstationary time series analysis in order to ensure robustness in the description of CL's cycles. Interannual cycles of the disease and the association of these cycles to climate variables were described using frequency and time-frequency techniques for time series analysis. We fitted linear models to the data using climatic predictors, and tested forecasting accuracy for several intervals of time. Forecasts were evaluated using “out of fit” data (i.e., data not used to fit the models). We showed that CL has cycles of approximately 3 y that are coherent with those of temperature and El Niño Southern Oscillation indices (Sea Surface Temperature 4 and Multivariate ENSO Index).

          Conclusions

          Linear models using temperature and MEI can predict satisfactorily CL incidence dynamics up to 12 mo ahead, with an accuracy that varies from 72% to 77% depending on prediction time. They clearly outperform simpler models with no climate predictors, a finding that further supports a dynamical link between the disease and climate.

          Abstract

          Using mathematical models, the authors show that cutaneous leishmaniasis has cycles of approximately three years that are related to temperature cycles and indices of the El Niño Southern Oscillation.

          Editors' Summary

          Background.

          Every year, 2 million people become infected with a pathogenic species of Leishmania, a parasite that is transmitted to humans through the bites of infected sand flies. These flies—the insect vectors for disease transmission—pick up parasites by biting infected animals—the reservoirs for the parasite. Once in a person, some species of Leishmania can cause cutaneous leishmaniasis, a condition characterized by numerous skin lesions. These usually heal spontaneously but can leave ugly, sometimes disabling scars. Leishmaniasis is endemic and constantly present in many tropical and temperate countries, but as with other diseases that are transmitted by insect vectors (for example, malaria), the occurrence of cases has a strong seasonal pattern and also varies from year to year (interannual variability). These fluctuations suggest that leishmaniasis transmission is sensitive to seasonal changes in the climate and to climatic events like the El Niño Southern Oscillation (ENSO), a major cause of interannual weather and climate variation around the world that repeats every 3–4 years. This sensitivity arises because the climate directly affects the abundance of sand flies and how quickly the parasites replicate.

          Why Was This Study Done?

          It would be very useful to have early warning systems for leishmaniasis and other vector-transmitted diseases so that public health officials could prepare for epidemics—or spikes in the number of cases—of these diseases. Monitoring of climatic changes could form the basis of such systems. But although it is clear that the transmission of cutaneous leishmaniasis is affected by fluctuations in the climate, there have been no detailed studies into the dynamics of its seasonal or yearly variation. In this study, the researchers used climatic data and information about cutaneous leishmaniasis in Costa Rica to build statistical models that investigate how climate affects leishmaniasis transmission.

          What Did the Researchers Do and Find?

          The researchers obtained the monthly records for cutaneous leishmaniasis in Costa Rica for 1991 to 2001. They then used several advanced statistical models to investigate how these data relate to climatic variables such as the sea surface temperature (a measure of El Niño, a large-scale warming of the sea), average temperature in Costa Rica, and the MEI (the Multivariate ENSO Index, a collection of temperature and air pressure measurements that predicts when the ENSO is going to occur). Their analyses show that cutaneous leishmaniasis cases usually peak in May and that the incidence of the disease (number of cases occurring in the population over a set time period) rises and falls in three-year cycles. These cycles, they report, match up with similar-length cycles in the climatic variables that they investigated. Furthermore, when the researchers tested the models they had constructed with data that had not been used to construct the models (“out of fit” data), the models predicted variations in the incidence of cutaneous leishmaniasis for up 12 months with an accuracy of about 75% (that is, the predictions were correct three times out of four).

          What Do These Findings Mean?

          The finding that interannual cycles of climate variables and cutaneous leishmaniasis coincide provides strong evidence that climate does indeed affect the transmission of this disease. This link is strengthened by the ability of the statistical models described by the researchers to predict outbreaks with high accuracy. The researchers' new insights into how climate affects the transmission of cutaneous leishmaniasis are important because they open the door to the possibility of setting up an early warning system for this increasingly common disease. The same statistical approach could be used to improve understanding of how climate affects the dynamics of other vector-transmitted diseases and to design early warning systems for them as well—the World Health Organization has identified 18 diseases for which climate-based early warning systems might be useful but no such systems are currently being used to plan disease control strategies. Finally, the improved understanding of the relationship between climate and disease transmission that the researchers have gained through their study is an important step towards being able to predict how the incidence and distribution of leishmaniasis and other vector-transmitted diseases will be affected by global warming.

          Additional Information.

          Please access these Web sites via the online version of this summary at http://dx.doi.org/10.1371/journal.pmed.0030295.

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          Most cited references46

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          Why large-scale climate indices seem to predict ecological processes better than local weather.

          Large-scale climatic indices such as the North Atlantic Oscillation are associated with population dynamics, variation in demographic rates and values of phenotypic traits in many species. Paradoxically, these large-scale indices can seem to be better predictors of ecological processes than local climate. Using detailed data from a population of Soay sheep, we show that high rainfall, high winds or low temperatures at any time during a 3-month period can cause mortality either immediately or lagged by a few days. Most measures of local climate used by ecologists fail to capture such complex associations between weather and ecological process, and this may help to explain why large-scale, seasonal indices of climate spanning several months can outperform local climatic factors. Furthermore, we show why an understanding of the mechanism by which climate influences population ecology is important. Through simulation we demonstrate that the timing of bad weather within a period of mortality can have an important modifying influence on intraspecific competition for food, revealing an interaction between climate and density dependence that the use of large-scale climatic indices or inappropriate local weather variables might obscure.
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            Association between climate variability and malaria epidemics in the East African highlands.

            The causes of the recent reemergence of Plasmodium falciparum epidemic malaria in the East African highlands are controversial. Regional climate changes have been invoked as a major factor; however, assessing the impact of climate in malaria resurgence is difficult due to high spatial and temporal climate variability and the lack of long-term data series on malaria cases from different sites. Climate variability, defined as short-term fluctuations around the mean climate state, may be epidemiologically more relevant than mean temperature change, but its effects on malaria epidemics have not been rigorously examined. Here we used nonlinear mixed-regression model to investigate the association between autoregression (number of malaria outpatients during the previous time period), seasonality and climate variability, and the number of monthly malaria outpatients of the past 10-20 years in seven highland sites in East Africa. The model explained 65-81% of the variance in the number of monthly malaria outpatients. Nonlinear and synergistic effects of temperature and rainfall on the number of malaria outpatients were found in all seven sites. The net variance in the number of monthly malaria outpatients caused by autoregression and seasonality varied among sites and ranged from 18 to 63% (mean=38.6%), whereas 12-63% (mean=36.1%) of variance is attributed to climate variability. Our results suggest that there was a high spatial variation in the sensitivity of malaria outpatient number to climate fluctuations in the highlands, and that climate variability played an important role in initiating malaria epidemics in the East African highlands.
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              Use of rainfall and sea surface temperature monitoring for malaria early warning in Botswana.

              Improved prediction, prevention, and control of epidemics is a key technical element of the Roll Back Malaria partnership. We report a methodology for assessing the importance of climate as a driver of inter-annual variability in malaria in Botswana, and provide the evidence base for inclusion of climate information in a national malaria early warning system. The relationships of variability in rainfall and sea surface temperatures (SSTs) to malaria incidence are assessed at the national level after removing the impact of non-climatic trends and a major policy intervention. Variability in rainfall totals for the period December-February accounts for more than two-thirds of the inter-annual variability in standardized malaria incidence in Botswana (January-May). Both rainfall and annual malaria anomalies in December-February are significantly related to SSTs in the eastern Pacific, suggesting they may be predictable months in advance using seasonal climate forecasting methodologies.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                PLoS Med
                pmed
                PLoS Medicine
                Public Library of Science (San Francisco, USA )
                1549-1277
                1549-1676
                August 2006
                15 August 2006
                : 3
                : 8
                : e295
                Affiliations
                [1]Department of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan, United States of America
                University of Wisconsin, United States of America
                Author notes
                * To whom correspondence should be addressed. E-mail: lfchaves@ 123456umich.edu
                Article
                05-PLME-RA-0770R2 plme-03-08-18
                10.1371/journal.pmed.0030295
                1539092
                16903778
                e887d115-d342-46d6-b1c0-5b174b958ec7
                Copyright: © 2006 Chaves and Pascual. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
                History
                : 29 December 2005
                : 12 May 2006
                Page count
                Pages: 9
                Categories
                Research Article
                Infectious Diseases
                Infectious Diseases
                Public Health
                Custom metadata
                Chaves LF, Pascual M (2006) Climate cycles and forecasts of cutaneous leishmaniasis, a nonstationary vector-borne disease. PLoS Med 3(8): e295. DOI: 10.1371/journal.pmed.0030295

                Medicine
                Medicine

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