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      A short story of nearly everything in Lactifluus ( Russulaceae)

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          Abstract

          Fungi are a large and hyper-diverse group with major taxa present in every ecosystem on earth. However, compared to other eukaryotic organisms, their diversity is largely understudied. Since the rise of molecular techniques, new lineages are being discovered at an increasing rate, but many are not accurately characterised. Access to comprehensive and reliable taxonomic information of organisms is fundamental for research in different disciplines exploring a variety of questions. A globally dominant ectomycorrhizal (ECM) fungal family in terrestrial ecosystems is the Russulaceae ( Russulales, Basidiomycota) family. Amongst the mainly agaricoid Russulaceae genera, the ectomycorrhizal genus Lactifluus was historically least studied due to its largely tropical distribution in many underexplored areas and the apparent occurrence of several species complexes. Due to increased studies in the tropics, with a focus on this genus, knowledge on Lactifluus grew. We demonstrate here that Lactifluus is now one of the best-known ECM genera. This paper aims to provide a thorough overview of the current knowledge of Lactifluus, with information on diversity, distribution, ecology, phylogeny, taxonomy, morphology, and ethnomycological uses of species in this genus. This is a result of our larger study, aimed at building a comprehensive and complete dataset or taxonomic framework for Lactifluus, based on molecular, morphological, biogeographical, and taxonomical data as a tool and reference for other researchers.

          Citation: De Crop E, Delgat L, Nuytinck J, Halling RE, Verbeken A (2021). A short story of nearly everything in Lactifluus (Russulaceae). Fungal Systematics and Evolution 7: 133–164. doi: 10.3114/fuse.2021.07.07

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          Fungal biogeography. Global diversity and geography of soil fungi.

          Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA metabarcoding data from hundreds of globally distributed soil samples, we demonstrate that fungal richness is decoupled from plant diversity. The plant-to-fungus richness ratio declines exponentially toward the poles. Climatic factors, followed by edaphic and spatial variables, constitute the best predictors of fungal richness and community composition at the global scale. Fungi show similar latitudinal diversity gradients to other organisms, with several notable exceptions. These findings advance our understanding of global fungal diversity patterns and permit integration of fungi into a general macroecological framework.
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            The magnitude of fungal diversity: the 1.5 million species estimate revisited

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              Sequence-Based Species Delimitation for the DNA Taxonomy of Undescribed Insects

              Cataloging the very large number of undescribed species of insects could be greatly accelerated by automated DNA based approaches, but procedures for large-scale species discovery from sequence data are currently lacking. Here, we use mitochondrial DNA variation to delimit species in a poorly known beetle radiation in the genus Rivacindela from arid Australia. Among 468 individuals sampled from 65 sites and multiple morphologically distinguishable types, sequence variation in three mtDNA genes (cytochrome oxidase subunit 1, cytochrome b, 16S ribosomal RNA) was strongly partitioned between 46 or 47 putative species identified with quantitative methods of species recognition based on fixed unique ("diagnostic") characters. The boundaries between groups were also recognizable from a striking increase in branching rate in clock-constrained calibrated trees. Models of stochastic lineage growth (Yule models) were combined with coalescence theory to develop a new likelihood method that determines the point of transition from species-level (speciation and extinction) to population-level (coalescence) evolutionary processes. Fitting the location of the switches from speciation to coalescent nodes on the ultrametric tree of Rivacindela produced a transition in branching rate occurring at 0.43 Mya, leading to an estimate of 48 putative species (confidence interval for the threshold ranging from 47 to 51 clusters within 2 logL units). Entities delimited in this way exhibited biological properties of traditionally defined species, showing coherence of geographic ranges, broad congruence with morphologically recognized species, and levels of sequence divergence typical for closely related species of insects. The finding of discontinuous evolutionary groupings that are readily apparent in patterns of sequence variation permits largely automated species delineation from DNA surveys of local communities as a scaffold for taxonomy in this poorly known insect group.
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                Author and article information

                Journal
                Fungal Syst Evol
                Fungal Syst Evol
                FUSE
                Fungal Systematics and Evolution
                Westerdijk Fungal Biodiversity Institute
                2589-3823
                2589-3831
                1 February 2021
                June 2021
                : 7
                : 133-164
                Affiliations
                [1 ]Ghent University, Department of Biology, Research group Mycology, K. L. Ledeganckstraat 35, 9000 Ghent, Belgium
                [2 ]National Botanic Garden of Belgium (BR), Research Department, Domein van Bouchout, 1860 Meise, Belgium
                [3 ]Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, The Netherlands
                [4 ]The New York Botanical Garden, Institute of Systematic Botany, Bronx, NY 10458 USA
                Author notes
                *Corresponding author: Eske.DeCrop@ 123456UGent.be

                Corresponding editor: P.W. Crous

                Article
                10.3114/fuse.2021.07.07
                8166210
                34124621
                ed3ac624-189f-4acd-9e40-274289f14a58
                © 2021 Westerdijk Fungal Biodiversity Institute

                Fungal Systematics and Evolution is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License

                History
                : 7 October 2019
                : 8 January 2021
                Categories
                Articles

                ectomycorrhizal fungi,fungal diversity,lactarius,milkcaps,russulales

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