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      The diversity of AMPA receptor inhibition mechanisms among amidine-containing compounds

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          Abstract

          Amidine-containing compounds are primarily known as antiprotozoal agents (pentamidine, diminazene, furamidine) or as serine protease inhibitors (nafamostat, sepimostat, camostat, gabexate). DAPI is widely recognized as a fluorescent DNA stain. Recently, it has been shown that these compounds also act as NMDA receptor inhibitors. In this study, we examined the activity of these compounds and analyzed the mechanisms of action in relation to another important class of ionotropic glutamate receptors–calcium-permeable AMPA receptors (CP-AMPARs) and calcium-impermeable AMPA receptors (CI-AMPARs) – using the whole-cell patch-clamp method on isolated male Wistar rat brain neurons. Gabexate and camostat were found to be inactive. Other compounds preferentially inhibited calcium-permeable AMPA receptors with IC 50 values of 30–60 µM. DAPI and furamidine were also active against CI-AMPARs with IC 50s of 50–60 μM, while others showed poor activity. All active compounds acted as channel blockers, which are able for permeating into the cytoplasm on both CP- and CI-AMPARs. Specifically, sepimostat showed trapping in the closed CP-AMPAR channel. Furamidine and DAPI demonstrated a voltage-independent action on CI-AMPARs, indicating binding to an additional superficial site. While the majority of compounds inhibited glutamate-activated steady-state currents as well as kainate-activated currents on CI-AMPARs, pentamidine significantly potentiated glutamate-induced steady-state responses. The potentiating effect of pentamidine resembles the action of the positive allosteric modulator cyclothiazide although the exact binding site remains unclear. Thus, this study, together with our previous research on NMDA receptors, provides a comprehensive overview of this novel group of ionotropic glutamate receptors inhibitors with a complex pharmacological profile, remarkable diversity of effects and mechanisms of action.

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          Antidepressant effects of ketamine in depressed patients

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            Monte Carlo-minimization approach to the multiple-minima problem in protein folding.

            A Monte Carlo-minimization method has been developed to overcome the multiple-minima problem. The Metropolis Monte Carlo sampling, assisted by energy minimization, surmounts intervening barriers in moving through successive discrete local minima in the multidimensional energy surface. The method has located the lowest-energy minimum thus far reported for the brain pentapeptide [Met5]enkephalin in the absence of water. Presumably it is the global minimum-energy structure. This supports the concept that protein folding may be a Markov process. In the presence of water, the molecules appear to exist as an ensemble of different conformations.
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              Development and use of quantum mechanical molecular models. 76. AM1: a new general purpose quantum mechanical molecular model

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                Author and article information

                Contributors
                URI : https://loop.frontiersin.org/people/1555361/overviewRole: Role: Role: Role: Role: Role:
                URI : https://loop.frontiersin.org/people/1555424/overviewRole: Role: Role:
                URI : https://loop.frontiersin.org/people/1477038/overviewRole: Role: Role: Role: Role: Role:
                URI : https://loop.frontiersin.org/people/567502/overviewRole: Role: Role: Role: Role: Role: Role:
                Journal
                Front Pharmacol
                Front Pharmacol
                Front. Pharmacol.
                Frontiers in Pharmacology
                Frontiers Media S.A.
                1663-9812
                09 October 2024
                2024
                : 15
                : 1467266
                Affiliations
                Laboratory for the Research of the Mechanisms of Regulation and Compensation of Nervous System Excitability Pathologies, I.M. Sechenov Institute of Evolutionary Physiology and Biochemistry RAS , Saint Petersburg, Russia
                Author notes

                Edited by: Maria Yelshanskaya, Columbia University, United States

                Reviewed by: Linda Marie Nowak, Cornell University, United States

                Edward Twomey, Johns Hopkins University, United States

                *Correspondence: Arseniy S. Zhigulin, arseniy.zhigulin@ 123456yandex.ru
                Article
                1467266
                10.3389/fphar.2024.1467266
                11496081
                39444609
                ed6fc6c0-09bc-4071-bc60-8ade5e8fe71e
                Copyright © 2024 Zhigulin, Dron, Barygin and Tikhonov.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 19 July 2024
                : 27 September 2024
                Funding
                The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This work was supported by Grant No. 075-15-2024-548 from the Ministry of Science and Higher Education of the Russian Federation.
                Categories
                Pharmacology
                Original Research
                Custom metadata
                Pharmacology of Ion Channels and Channelopathies

                Pharmacology & Pharmaceutical medicine
                amidine compounds,ampa receptor,inhibition mechanisms,patch-clamp technique,pharmacological modulation

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