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      Amide proton transfer weighted (APTw) imaging based radiomics allows for the differentiation of gliomas from metastases

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          Abstract

          We sought to evaluate the utility of radiomics for Amide Proton Transfer weighted (APTw) imaging by assessing its value in differentiating brain metastases from high- and low grade glial brain tumors. We retrospectively identified 48 treatment-naïve patients (10 WHO grade 2, 1 WHO grade 3, 10 WHO grade 4 primary glial brain tumors and 27 metastases) with either primary glial brain tumors or metastases who had undergone APTw MR imaging. After image analysis with radiomics feature extraction and post-processing, machine learning algorithms (multilayer perceptron machine learning algorithm; random forest classifier) with stratified tenfold cross validation were trained on features and were used to differentiate the brain neoplasms. The multilayer perceptron achieved an AUC of 0.836 (receiver operating characteristic curve) in differentiating primary glial brain tumors from metastases. The random forest classifier achieved an AUC of 0.868 in differentiating WHO grade 4 from WHO grade 2/3 primary glial brain tumors. For the differentiation of WHO grade 4 tumors from grade 2/3 tumors and metastases an average AUC of 0.797 was achieved. Our results indicate that the use of radiomics for APTw imaging is feasible and the differentiation of primary glial brain tumors from metastases is achievable with a high degree of accuracy.

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          The Measurement of Observer Agreement for Categorical Data

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            Radiomics: Images Are More than Pictures, They Are Data

            This report describes the process of radiomics, its challenges, and its potential power to facilitate better clinical decision making, particularly in the care of patients with cancer.
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              Computational Radiomics System to Decode the Radiographic Phenotype

              Radiomics aims to quantify phenotypic characteristics on medical imaging through the use of automated algorithms. Radiomic artificial intelligence (AI) technology, either based on engineered hard-coded algorithms or deep learning methods, can be used to develop non-invasive imaging-based biomarkers. However, lack of standardized algorithm definitions and image processing severely hampers reproducibility and comparability of results. To address this issue, we developed PyRadiomics , a flexible open-source platform capable of extracting a large panel of engineered features from medical images. PyRadiomics is implemented in Python and can be used standalone or using 3D-Slicer. Here, we discuss the workflow and architecture of PyRadiomics and demonstrate its application in characterizing lung-lesions. Source code, documentation, and examples are publicly available at www.radiomics.io . With this platform, we aim to establish a reference standard for radiomic analyses, provide a tested and maintained resource, and to grow the community of radiomic developers addressing critical needs in cancer research.
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                Author and article information

                Contributors
                manoj.mannil@ukmuenster.de
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                9 March 2021
                9 March 2021
                2021
                : 11
                : 5506
                Affiliations
                [1 ]GRID grid.452288.1, ISNI 0000 0001 0697 1703, Institute of Radiology, , Kantonsspital Winterthur, ; Winterthur, Switzerland
                [2 ]GRID grid.7400.3, ISNI 0000 0004 1937 0650, Faculty of Medicine, , University of Zürich, ; Zürich, Switzerland
                [3 ]Philips Healthsystems, Zürich, Switzerland
                [4 ]GRID grid.8534.a, ISNI 0000 0004 0478 1713, Department of Medicine, , University of Fribourg, ; Fribourg, Switzerland
                [5 ]GRID grid.413366.5, ISNI 0000 0004 0511 7283, Department of Radiology, , HFR Fribourg-Hôpital Cantonal, ; Fribourg, Switzerland
                [6 ]GRID grid.413357.7, ISNI 0000 0000 8704 3732, Department of Neuroradiology, , Kantonsspital Aarau, ; Aarau, Switzerland
                [7 ]Institute of Clinical Radiology, University Hospital Münster, University of Münster, Albrecht-Schweitzer-Campus 1, E48149 Münster, Germany
                Article
                85168
                10.1038/s41598-021-85168-8
                7943598
                33750899
                ef6366a5-4b59-4c28-b2c0-2b3cbc3a57ab
                © The Author(s) 2021

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 29 November 2020
                : 24 February 2021
                Funding
                Funded by: Westfälische Wilhelms-Universität Münster (1056)
                Categories
                Article
                Custom metadata
                © The Author(s) 2021

                Uncategorized
                biomarkers,health care,medical research,neurology,oncology,signs and symptoms
                Uncategorized
                biomarkers, health care, medical research, neurology, oncology, signs and symptoms

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