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      Call for Papers: Digital Platforms and Artificial Intelligence in Dementia

      Submit here by August 31, 2025

      About Dementia and Geriatric Cognitive Disorders: 2.2 Impact Factor I 4.7 CiteScore I 0.809 Scimago Journal & Country Rank (SJR)

      Call for Papers: Skin Health in Aging Populations

      Submit here by August 31, 2025

      About Skin Pharmacology and Physiology: 2.8 Impact Factor I 5.2 CiteScore I 0.623 Scimago Journal & Country Rank (SJR)

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      Bacterial Skin Dysbiosis in Darier Disease

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          Abstract

          Introduction

          Darier disease is a rare inherited disease with dominant skin manifestations including keratotic papules and plaques on sebaceous and flexural areas. Secondary infection of skin lesions is common, and Staphylococcus aureus commonly colonizes these lesions. The aim of the study was to characterize the bacterial microbiome of cutaneous Darier lesions compared to normal-looking skin and disease severity.

          Methods

          All patients with a history of Darier followed up at Emek Medical Center were invited to participate in the study. Patients that did not use antibiotics in the past month and signed informed consent had four skin sites sampled with swabs: scalp, chest, axilla, and palm. All samples were analyzed for bacterial microbiome using 16S rDNA sequencing.

          Results

          Two hundred and eighty microbiome samples obtained from lesional and non-lesional skin of the scalp, chest, axilla, and palm of 42 Darier patients were included in the analysis. The most abundant bacterial genera across all skin sites were Propionibacterium, Corynebacterium, Paracoccus, Micrococcus, and Anaerococcus. Scalp and chest lesions featured a distinct microbiome configuration that was mainly driven by an overabundance of Staphylococci species. Patients with more severe disease exhibited microbiome alterations in the chest, axilla, and palm compared with patients with only mild disease, driven by Peptoniphilus and Moryella genera in scalp and palmar lesions, respectively.

          Conclusion

          Staphylococci were significantly associated with Darier lesions and drove Darier-associated dysbiosis. Severity of the disease was associated with two other bacterial genera. Whether these associations also hold a causative role and may serve as a therapeutic target remains to be determined and requires further investigation.

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          Most cited references41

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          DADA2: High resolution sample inference from Illumina amplicon data

          We present DADA2, a software package that models and corrects Illumina-sequenced amplicon errors. DADA2 infers sample sequences exactly, without coarse-graining into OTUs, and resolves differences of as little as one nucleotide. In several mock communities DADA2 identified more real variants and output fewer spurious sequences than other methods. We applied DADA2 to vaginal samples from a cohort of pregnant women, revealing a diversity of previously undetected Lactobacillus crispatus variants.
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            Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

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              Is Open Access

              Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies

              16S ribosomal RNA gene (rDNA) amplicon analysis remains the standard approach for the cultivation-independent investigation of microbial diversity. The accuracy of these analyses depends strongly on the choice of primers. The overall coverage and phylum spectrum of 175 primers and 512 primer pairs were evaluated in silico with respect to the SILVA 16S/18S rDNA non-redundant reference dataset (SSURef 108 NR). Based on this evaluation a selection of ‘best available’ primer pairs for Bacteria and Archaea for three amplicon size classes (100–400, 400–1000, ≥1000 bp) is provided. The most promising bacterial primer pair (S-D-Bact-0341-b-S-17/S-D-Bact-0785-a-A-21), with an amplicon size of 464 bp, was experimentally evaluated by comparing the taxonomic distribution of the 16S rDNA amplicons with 16S rDNA fragments from directly sequenced metagenomes. The results of this study may be used as a guideline for selecting primer pairs with the best overall coverage and phylum spectrum for specific applications, therefore reducing the bias in PCR-based microbial diversity studies.

                Author and article information

                Journal
                Dermatology
                Dermatology
                DRM
                DRM
                Dermatology (Basel, Switzerland)
                S. Karger AG (Basel, Switzerland )
                1018-8665
                1421-9832
                8 February 2024
                June 2024
                : 240
                : 3
                : 443-452
                Affiliations
                [a ]Division of Dermatology, Rabin Medical Center, Petah Tikvah, Israel
                [b ]School of Medicine, Faculty of Medical and Health Sciences, Tel Aviv University, Tel Aviv, Israel
                [c ]Systems Immunology Department, Weizmann Institute of Science, Rehovot, Israel
                [d ]Department of Surgery, Tel Aviv Sourasky Medical Center, Tel Aviv, Israel
                [e ]Dead Sea and Arava Science Center, Dead Sea Branch, Masada, Israel
                [f ]Department of Dermatology, Emek Medical Center, Afula, Israel
                [g ]Bruce and Ruth Rappaport Faculty of Medicine, Technion, Haifa, Israel
                [h ]Microbiome and Cancer Division, DKFZ, Heidelberg, Germany
                [i ]Davidoff Cancer Center, Rabin Medical Center-Beilinson Hospital, Petah Tikva, Israel
                [j ]Department of Medicine, University of Toronto, Toronto, ON, Canada
                Author notes
                Correspondence to: Ofer Reiter, ofer.rtr@ 123456gmail.com

                Drs. Ofer Reiter and Avner Leshem and Profs. Emmilia Hodak and Roni P. Dodiuk-Gad contributed equally to this work.

                Article
                537714
                10.1159/000537714
                11168447
                38330926
                f2ed206f-eeef-4373-be03-17bc67467a3b
                © 2024 The Author(s). Published by S. Karger AG, Basel

                This article is licensed under the Creative Commons Attribution-NonCommercial 4.0 International License (CC BY-NC) ( http://www.karger.com/Services/OpenAccessLicense). Usage and distribution for commercial purposes requires written permission.

                History
                : 20 October 2022
                : 5 February 2024
                : 2024
                Page count
                Figures: 6, Tables: 1, References: 37, Pages: 10
                Funding
                This study was supported by the Israeli Ministry of Science and Technology (Grants 3-11174, 3-16033). The funding organizations were not involved in study design, data collection, data analysis, or any other stage of the research.
                Categories
                Skin Infections – Research Article

                Dermatology
                microbiome,darier disease,staphylococcus,peptoniphilus,moryella
                Dermatology
                microbiome, darier disease, staphylococcus, peptoniphilus, moryella

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