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      Karyotype and genome size comparative analyses among six species of the oilseed-bearing genus Jatropha (Euphorbiaceae)

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          Abstract

          Jatropha is an important genus of Euphorbiaceae, with species largely used for various purposes, including the manufacturing of soaps and pharmaceutical products and applications in the bioenergetic industry. Although there have been several studies focusing J. curcas in various aspects, the karyotype features of Jatropha species are poorly known. Therefore, we analyzed six Jatropha species through fluorochrome staining (CMA/DAPI), fluorescent in situ hybridization (FISH) with 5S and 45S rDNA probes and genome size estimation by flow cytometry. Our results revealed several chromosome markers by both CMA/DAPI and FISH for the analyzed species. Five Jatropha species ( J. curcas, J. gossypiifolia, J. integerrima , J. multifida and J. podagrica ) showed four CMA-positive (CMA +) bands associated with the 5S and 45S rDNA sites (one and two pairs, respectively). However, J. mollissima displayed six CMA +/DAPI - bands co-localized with both 5S and 45S rDNA, which showed a FISH superposition. A gradual variation in the genome sizes was observed (2C = 0.64 to 0.86 pg), although an association between evidenced heterochromatin and genome sizes was not found among species. Except for the unique banding pattern of J. mollissima and the pericentromeric heterochromatin of J. curcas and J. podagrica, our data evidenced relatively conserved karyotypes.

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          Finely orchestrated movements: evolution of the ribosomal RNA genes.

          Evolution of the tandemly repeated ribosomal RNA (rRNA) genes is intriguing because in each species all units within the array are highly uniform in sequence but that sequence differs between species. In this review we summarize the origins of the current models to explain this process of concerted evolution, emphasizing early studies of recombination in yeast and more recent studies in Drosophila and mammalian systems. These studies suggest that unequal crossover is the major driving force in the evolution of the rRNA genes with sister chromatid exchange occurring more often than exchange between homologs. Gene conversion is also believed to play a role; however, direct evidence for its involvement has not been obtained. Remarkably, concerted evolution is so well orchestrated that even transposable elements that insert into a large fraction of the rRNA genes appear to have little effect on the process. Finally, we summarize data that suggest that recombination in the rDNA locus of higher eukaryotes is sufficiently frequent to monitor changes within a few generations.
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            The Chromosome Counts Database (CCDB) - a community resource of plant chromosome numbers.

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              A review of Jatropha curcas: an oil plant of unfulfilled promise

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                Author and article information

                Journal
                Genet Mol Biol
                Genet. Mol. Biol
                gmb
                Genetics and Molecular Biology
                Sociedade Brasileira de Genética
                1415-4757
                1678-4685
                14 May 2018
                Apr-Jun 2018
                : 41
                : 2
                : 442-449
                Affiliations
                [1 ] normalizedUniversidade Federal de Pernambuco orgnameUniversidade Federal de Pernambuco orgdiv1Department of Genetics Recife PE Brazil originalDepartment of Genetics, Universidade Federal de Pernambuco, Recife, PE, Brazil
                [2 ] normalizedInstituto Tecnológico Vale orgnameInstituto Tecnológico Vale Belém PA Brazil originalInstituto Tecnológico Vale, Belém, PA, Brazil
                [3 ] normalizedInstituto Agronômico orgnameInstituto Agronômico orgdiv1Centro de P&D de Recursos Genéticos Vegetais Campinas SP Brazil originalCentro de P&D de Recursos Genéticos Vegetais, Instituto Agronômico, Campinas, SP, Brazil
                Author notes
                Send correpondence to Santelmo Vasconcelos, Instituto Tecnológico Vale – Desenvolvimento Sustentável, Rua Boaventura da Silva 955, 66055-090 Belém PA, Brazil. E-mail: santelmo.vasconcelos@ 123456itv.org .
                Author information
                http://orcid.org/0000-0002-9717-1169
                Article
                10.1590/1678-4685-GMB-2017-0120
                6082239
                29767665
                f3546078-6959-4b96-9ccb-fcffd139e320
                Copyright © 2018, Sociedade Brasileira de Genética.

                License information: This is an open-access article distributed under the terms of the Creative Commons Attribution License (type CC-BY), which permits unrestricted use, distribution and reproduction in any medium, provided the original article is properly cited.

                History
                : 04 May 2017
                : 19 September 2017
                Page count
                Figures: 4, Tables: 1, Equations: 0, References: 49, Pages: 8
                Categories
                Plant Genetics

                Molecular biology
                cytotaxonomy,dna c-value,heterochromatin,physic nut,rdna
                Molecular biology
                cytotaxonomy, dna c-value, heterochromatin, physic nut, rdna

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