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      Stock assessment and end-to-end ecosystem models alter dynamics of fisheries data

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          Abstract

          Although all models are simplified approximations of reality, they remain useful tools for understanding, predicting, and managing populations and ecosystems. However, a model’s utility is contingent on its suitability for a given task. Here, we examine two model types: single-species fishery stock assessment and multispecies marine ecosystem models. Both are efforts to predict trajectories of populations and ecosystems to inform fisheries management and conceptual understanding. However, many of these ecosystems exhibit nonlinear dynamics, which may not be represented in the models. As a result, model outputs may underestimate variability and overestimate stability. Using nonlinear forecasting methods, we compare predictability and nonlinearity of model outputs against model inputs using data and models for the California Current System. Compared with model inputs, time series of model-processed outputs show more predictability but a higher prevalence of linearity, suggesting that the models misrepresent the actual predictability of the modeled systems. Thus, caution is warranted: using such models for management or scenario exploration may produce unforeseen consequences, especially in the context of unknown future impacts.

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          Fishing elevates variability in the abundance of exploited species.

          The separation of the effects of environmental variability from the impacts of fishing has been elusive, but is essential for sound fisheries management. We distinguish environmental effects from fishing effects by comparing the temporal variability of exploited versus unexploited fish stocks living in the same environments. Using the unique suite of 50-year-long larval fish surveys from the California Cooperative Oceanic Fisheries Investigations we analyse fishing as a treatment effect in a long-term ecological experiment. Here we present evidence from the marine environment that exploited species exhibit higher temporal variability in abundance than unexploited species. This remains true after accounting for life-history effects, abundance, ecological traits and phylogeny. The increased variability of exploited populations is probably caused by fishery-induced truncation of the age structure, which reduces the capacity of populations to buffer environmental events. Therefore, to avoid collapse, fisheries must be managed not only to sustain the total viable biomass but also to prevent the significant truncation of age structure. The double jeopardy of fishing to potentially deplete stock sizes and, more immediately, to amplify the peaks and valleys of population variability, calls for a precautionary management approach.
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            Distinguishing random environmental fluctuations from ecological catastrophes for the North Pacific Ocean.

            The prospect of rapid dynamic changes in the environment is a pressing concern that has profound management and public policy implications. Worries over sudden climate change and irreversible changes in ecosystems are rooted in the potential that nonlinear systems have for complex and 'pathological' behaviours. Nonlinear behaviours have been shown in model systems and in some natural systems, but their occurrence in large-scale marine environments remains controversial. Here we show that time series observations of key physical variables for the North Pacific Ocean that seem to show these behaviours are not deterministically nonlinear, and are best described as linear stochastic. In contrast, we find that time series for biological variables having similar properties exhibit a low-dimensional nonlinear signature. To our knowledge, this is the first direct test for nonlinearity in large-scale physical and biological data for the marine environment. These results address a continuing debate over the origin of rapid shifts in certain key marine observations as coming from essentially stochastic processes or from dominant nonlinear mechanisms. Our measurements suggest that large-scale marine ecosystems are dynamically nonlinear, and as such have the capacity for dramatic change in response to stochastic fluctuations in basin-scale physical states.
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              An Integrated Approach Is Needed for Ecosystem Based Fisheries Management: Insights from Ecosystem-Level Management Strategy Evaluation

              An ecosystem approach is widely seen as a desirable goal for fisheries management but there is little consensus on what strategies or measures are needed to achieve it. Management strategy evaluation (MSE) is a tool that has been widely used to develop and test single species fisheries management strategies and is now being extended to support ecosystem based fisheries management (EBFM). We describe the application of MSE to investigate alternative strategies for achieving EBFM goals for a complex multispecies fishery in southeastern Australia. The study was undertaken as part of a stakeholder driven process to review and improve the ecological, economic and social performance of the fishery. An integrated management strategy, involving combinations of measures including quotas, gear controls and spatial management, performed best against a wide range of objectives and this strategy was subsequently adopted in the fishery, leading to marked improvements in performance. Although particular to one fishery, the conclusion that an integrated package of measures outperforms single focus measures we argue is likely to apply widely in fisheries that aim to achieve EBFM goals.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                15 February 2017
                2017
                : 12
                : 2
                : e0171644
                Affiliations
                [1 ]Department of Mathematics and Statistics, University of New Hampshire, Durham, New Hampshire, United States
                [2 ]Korbel School of International Studies, University of Denver, Denver, Colorado, United States
                [3 ]Secure Fisheries, One Earth Future Foundation, Broomfield, Colorado, United States
                [4 ]Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California, United States
                [5 ]Union of Concerned Scientists, Cambridge, Massachusetts, United States
                Technical University of Denmark, DENMARK
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                • Conceptualization: AAR SMG.

                • Data curation: SMG.

                • Formal analysis: LSS.

                • Funding acquisition: AAR.

                • Investigation: LSS.

                • Methodology: HY.

                • Resources: HY SMG.

                • Software: HY.

                • Supervision: AAR SMG.

                • Validation: LSS.

                • Visualization: LSS.

                • Writing – original draft: LSS.

                • Writing – review & editing: LSS SMG HY AAR.

                Article
                PONE-D-16-34598
                10.1371/journal.pone.0171644
                5310756
                28199344
                f44fbb2a-8e4e-430c-8845-dee175dc473d
                © 2017 Storch et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 29 August 2016
                : 24 January 2017
                Page count
                Figures: 2, Tables: 3, Pages: 11
                Funding
                Funded by: Department of Defense Strategic Environmental Research and Development Program
                Award ID: 15 RC-2509
                Funded by: funder-id http://dx.doi.org/10.13039/100000192, National Oceanic and Atmospheric Administration;
                Award ID: NA09NMF4720177 and NA08OAR4320894
                Award Recipient :
                Funded by: Lenfest Ocean Program
                Award ID: 00028335
                Funded by: McQuown Fund
                Funding for the research study was provided through the United States National Science Foundation ( http://www.nsf.gov) and National Oceanic and Atmospheric Administration’s ( http://www.noaa.gov) Comparative Analysis of Marine Ecosystem Organization (CAMEO) program, grants NA09NMF4720177 and NA08OAR4320894. Funding for the publication of the paper was provided through the United States Department of Defense Strategic Environmental Research and Development Program, grant 15 RC-2509, the Lenfest Ocean Program, award number 00028335, and the McQuown Fund. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology and Life Sciences
                Agriculture
                Fisheries
                Biology and Life Sciences
                Computational Biology
                Ecosystem Modeling
                Biology and Life Sciences
                Ecology
                Ecosystems
                Ecosystem Modeling
                Ecology and Environmental Sciences
                Ecology
                Ecosystems
                Ecosystem Modeling
                Computer and Information Sciences
                Systems Science
                Nonlinear Dynamics
                Physical Sciences
                Mathematics
                Systems Science
                Nonlinear Dynamics
                Biology and Life Sciences
                Ecology
                Ecosystems
                Ecology and Environmental Sciences
                Ecology
                Ecosystems
                Research and Analysis Methods
                Mathematical and Statistical Techniques
                Statistical Methods
                Forecasting
                Physical Sciences
                Mathematics
                Statistics (Mathematics)
                Statistical Methods
                Forecasting
                Biology and Life Sciences
                Ecology
                Ecosystems
                Marine Ecosystems
                Ecology and Environmental Sciences
                Ecology
                Ecosystems
                Marine Ecosystems
                Computer and Information Sciences
                Information Technology
                Data Processing
                Computer and Information Sciences
                Systems Science
                Nonlinear Systems
                Physical Sciences
                Mathematics
                Systems Science
                Nonlinear Systems
                Custom metadata
                All relevant data produced in this study are within the paper and its Supporting Information files. Fisheries data used in the analysis are publicly available at the following locations: CalCOFI: calcofi.org, Landings: dfg.ca.gov, Stock assessment: www.pcouncil.org. Atlantis model outputs are available upon request from the Northwest Fisheries Science Center (nwfsc.noaa.gov).

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