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      Pharmacological inhibition of cystine–glutamate exchange induces endoplasmic reticulum stress and ferroptosis

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          Abstract

          Exchange of extracellular cystine for intracellular glutamate by the antiporter system x c is implicated in numerous pathologies. Pharmacological agents that inhibit system x c activity with high potency have long been sought, but have remained elusive. In this study, we report that the small molecule erastin is a potent, selective inhibitor of system x c . RNA sequencing revealed that inhibition of cystine–glutamate exchange leads to activation of an ER stress response and upregulation of CHAC1, providing a pharmacodynamic marker for system x c inhibition. We also found that the clinically approved anti-cancer drug sorafenib, but not other kinase inhibitors, inhibits system x c function and can trigger ER stress and ferroptosis. In an analysis of hospital records and adverse event reports, we found that patients treated with sorafenib exhibited unique metabolic and phenotypic alterations compared to patients treated with other kinase-inhibiting drugs. Finally, using a genetic approach, we identified new genes dramatically upregulated in cells resistant to ferroptosis.

          DOI: http://dx.doi.org/10.7554/eLife.02523.001

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          Sugars, fats, amino acids, and other nutrients cannot simply diffuse into the cell. Rather, they must be transported across the cell membrane by specific proteins that stretch from one side of the cell membrane to the other. One such ‘transporter’—system x c —is of special interest. This transporter imports one molecule of cystine from outside the cell in exchange for one molecule of glutamate from inside the cell. Cystine, a variant of the amino acid cysteine, is essential for synthesizing new proteins and for preventing the accumulation of toxic species inside the cell. Not surprisingly, many cancer cells are dependent upon the transport activity of system x c for growth and survival. Drugs that can inhibit system x c could therefore be part of potential treatments for cancer and other diseases.

          Dixon, Patel, et al. have found that the compound erastin is a very effective inhibitor of system x c function. Certain versions of erastin are over 1000 times more potent than the previously known best inhibitor of system x c , sulfasalazine. Dixon, Patel et al. found that using erastin and sulfasalazine to inhibit system x c in cancer cells grown in a petri dish results in an unusual type of iron-dependent cell death called ferroptosis. By inhibiting the uptake of cystine, erastin and other system x c inhibitors interfere with the cellular machinery that folds proteins into their final, three-dimensional shape. The accumulation of these partially-folded proteins in the cell causes a specific kind of cellular stress that can be used as a readout, or biomarker, for the inhibition of system x c . Such a biomarker will be essential for identifying cells in the body that have been exposed to agents that inhibit system x c and that are undergoing ferroptosis.

          Unexpectedly, Dixon, Patel et al. also found that the FDA-approved anti-cancer drug sorafenib inhibits system x c . Other drugs in the same class as sorafenib do not share this unusual property. Dixon, Patel, et al. synthesized variants of sorafenib and identified sites on the drug that are necessary for it to be able to interfere with system x c . Alongside the erastin derivatives, these new molecules may help to develop new drugs that can inhibit this important transporter in a clinical setting.

          DOI: http://dx.doi.org/10.7554/eLife.02523.002

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          Most cited references70

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          Ferroptosis: an iron-dependent form of nonapoptotic cell death.

          Nonapoptotic forms of cell death may facilitate the selective elimination of some tumor cells or be activated in specific pathological states. The oncogenic RAS-selective lethal small molecule erastin triggers a unique iron-dependent form of nonapoptotic cell death that we term ferroptosis. Ferroptosis is dependent upon intracellular iron, but not other metals, and is morphologically, biochemically, and genetically distinct from apoptosis, necrosis, and autophagy. We identify the small molecule ferrostatin-1 as a potent inhibitor of ferroptosis in cancer cells and glutamate-induced cell death in organotypic rat brain slices, suggesting similarities between these two processes. Indeed, erastin, like glutamate, inhibits cystine uptake by the cystine/glutamate antiporter (system x(c)(-)), creating a void in the antioxidant defenses of the cell and ultimately leading to iron-dependent, oxidative death. Thus, activation of ferroptosis results in the nonapoptotic destruction of certain cancer cells, whereas inhibition of this process may protect organisms from neurodegeneration. Copyright © 2012 Elsevier Inc. All rights reserved.
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            Transcript assembly and abundance estimation from RNA-Seq reveals thousands of new transcripts and switching among isoforms

            High-throughput mRNA sequencing (RNA-Seq) holds the promise of simultaneous transcript discovery and abundance estimation 1-3 . We introduce an algorithm for transcript assembly coupled with a statistical model for RNA-Seq experiments that produces estimates of abundances. Our algorithms are implemented in an open source software program called Cufflinks. To test Cufflinks, we sequenced and analyzed more than 430 million paired 75bp RNA-Seq reads from a mouse myoblast cell line representing a differentiation time series. We detected 13,692 known transcripts and 3,724 previously unannotated ones, 62% of which are supported by independent expression data or by homologous genes in other species. Analysis of transcript expression over the time series revealed complete switches in the dominant transcription start site (TSS) or splice-isoform in 330 genes, along with more subtle shifts in a further 1,304 genes. These dynamics suggest substantial regulatory flexibility and complexity in this well-studied model of muscle development.
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              Regulation of ferroptotic cancer cell death by GPX4.

              Ferroptosis is a form of nonapoptotic cell death for which key regulators remain unknown. We sought a common mediator for the lethality of 12 ferroptosis-inducing small molecules. We used targeted metabolomic profiling to discover that depletion of glutathione causes inactivation of glutathione peroxidases (GPXs) in response to one class of compounds and a chemoproteomics strategy to discover that GPX4 is directly inhibited by a second class of compounds. GPX4 overexpression and knockdown modulated the lethality of 12 ferroptosis inducers, but not of 11 compounds with other lethal mechanisms. In addition, two representative ferroptosis inducers prevented tumor growth in xenograft mouse tumor models. Sensitivity profiling in 177 cancer cell lines revealed that diffuse large B cell lymphomas and renal cell carcinomas are particularly susceptible to GPX4-regulated ferroptosis. Thus, GPX4 is an essential regulator of ferroptotic cancer cell death. Copyright © 2014 Elsevier Inc. All rights reserved.
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                Author and article information

                Contributors
                URI : http://orcid.org/0000-0002-3532-3868
                Role: Reviewing editor
                Journal
                eLife
                Elife
                eLife
                eLife
                eLife
                eLife Sciences Publications, Ltd
                2050-084X
                20 May 2014
                2014
                : 3
                : e02523
                Affiliations
                [1 ]Department of Biological Sciences, Columbia University , New York, United States
                [2 ]Brain Science Institute, Johns Hopkins Medicine , Baltimore, United States
                [3 ]Department of Biomedical Informatics, Columbia University , New York, United States
                [4 ]Department of Medicine, Columbia University , New York, United States
                [5 ]Department of Systems Biology, Columbia University , New York, United States
                [6 ]Department of Neurology, Johns Hopkins Medicine , Baltimore, United States
                [7 ]Department of Chemistry, Columbia University , New York, United States
                [8 ]Howard Hughes Medical Institute, Columbia University , New York, United States
                University of Illinois-Urbana Champaign , United States
                University of Illinois-Urbana Champaign , United States
                Author notes
                [* ]For correspondence: bstockwell@ 123456columbia.edu
                [†]

                These authors contributed equally to this work.

                [‡]

                Department of Biology, Stanford University, Stanford, United States.

                Article
                02523
                10.7554/eLife.02523
                4054777
                24844246
                f517e18c-70db-4ef8-b74a-96fede253767
                Copyright © 2014, Dixon et al

                This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

                History
                : 12 February 2014
                : 17 May 2014
                Funding
                Funded by: Howard Hughes Medical Institute FundRef identification ID: http://dx.doi.org/10.13039/100000011
                Award ID: Brent Stockwell Award
                Award Recipient :
                Funded by: National Institutes of Health FundRef identification ID: http://dx.doi.org/10.13039/100000002
                Award ID: 5R01CA097061, 5R01GM085081 and R01CA161061
                Award Recipient :
                Funded by: New York Stem Cell Science
                Award ID: C026715
                Award Recipient :
                Funded by: National Institutes of Health FundRef identification ID: http://dx.doi.org/10.13039/100000002
                Award ID: 1K99CA166517-01
                Award Recipient :
                The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication.
                Categories
                Research Article
                Cell Biology
                Human Biology and Medicine
                Custom metadata
                0.7
                Erastin and sorafenib inhibit system x c - and induce ER stress, suggesting these may be useful tools for probing the functions of system x c - and its role in inducing ER stress and ferroptosis.

                Life sciences
                reactive oxygen species,cell death,slc7a11,cystine,sorafenib,erastin,human
                Life sciences
                reactive oxygen species, cell death, slc7a11, cystine, sorafenib, erastin, human

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