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      FAIR Digital Objects and Natural Science Collection Data

      Biodiversity Information Science and Standards
      Pensoft Publishers

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          Abstract

          The Distributed System of Scientific Collections (DiSSCo) is a new Research Infrastructure that is working towards the unification of all European natural science collections under common curation, access policies, and practices (Addink et al. 2019). The physical specimens in the collections and the vast amount of data derived from and linked to these specimens are important building blocks for this unification process. Primarily coming from large scale digitization projects (Blagoderov et al. 2012) along with new types of data collection, curation, and sharing methods (e.g. Kays et al. 2020), these specimens hold data that are critical for different scientific endeavours (Cook et al. 2020, Hedrick et al. 2020). Therefore it is important that the data infrastructure and the relevant services can provide a long-term sustainable and reliable access to these data. To that end, DiSSCo is working towards transforming a fragmented landscape of the natural science collections into an integrated data infrastructure that can ensure that these data can be easily Findable, more Accessible, Interoperable and Reusable – in other words, comply with the FAIR Guiding Principles (Wilkinson et al. 2016).A key decision for the design of this FAIR data infrastructure was to adopt FAIR Digital Objects (Wittenburg and Strawn 2019) that will enable the creation of Digital Specimen—a machine-actionable digital twin of the physical specimen (Lannom et al. 2020). This FAIR Digital Object by design, ensures FAIRness of the data (De Smedt et al. 2020) and thus will allow DiSSCo to provide services that are essential for natural science collection-based research. This talk summarises the motivation behind this adoption by showing how design decisions and best practices were influenced by the FAIR data principles, global discussions around FAIR Digital Objects and outputs from the Research Data Alliance (RDA) interest and working groups.

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          Digitization and the Future of Natural History Collections

          Natural history collections (NHCs) are the foundation of historical baselines for assessing anthropogenic impacts on biodiversity. Along these lines, the online mobilization of specimens via digitization—the conversion of specimen data into accessible digital content—has greatly expanded the use of NHC collections across a diversity of disciplines. We broaden the current vision of digitization (Digitization 1.0)—whereby specimens are digitized within NHCs—to include new approaches that rely on digitized products rather than the physical specimen (Digitization 2.0). Digitization 2.0 builds on the data, workflows, and infrastructure produced by Digitization 1.0 to create digital-only workflows that facilitate digitization, curation, and data links, thus returning value to physical specimens by creating new layers of annotation, empowering a global community, and developing automated approaches to advance biodiversity discovery and conservation. These efforts will transform large-scale biodiversity assessments to address fundamental questions including those pertaining to critical issues of global change.
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            No specimen left behind: industrial scale digitization of natural history collections

            Abstract Traditional approaches for digitizing natural history collections, which include both imaging and metadata capture, are both labour- and time-intensive. Mass-digitization can only be completed if the resource-intensive steps, such as specimen selection and databasing of associated information, are minimized. Digitization of larger collections should employ an “industrial” approach, using the principles of automation and crowd sourcing, with minimal initial metadata collection including a mandatory persistent identifier. A new workflow for the mass-digitization of natural history museum collections based on these principles, and using SatScan® tray scanning system, is described.
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              An empirical evaluation of camera trap study design: how many, how long, and when?

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                Author and article information

                Contributors
                Journal
                Biodiversity Information Science and Standards
                BISS
                Pensoft Publishers
                2535-0897
                October 07 2020
                October 07 2020
                : 4
                Article
                10.3897/biss.4.59254
                f7ca1b01-3498-4e87-be1e-565b9fb9b8f7
                © 2020

                http://creativecommons.org/licenses/by/4.0/

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