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      Detection of viable but non cultivable Escherichia coli after UV irradiation using a lytic Qβ phage

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          Abstract

          In order to qualify the germicidal efficacy of ultraviolet (UV) disinfection system, we generally determine the reduction of viable bacteria after UV-C irradiation. However, the simple count of viable and cultivable bacteria in usual media cannot reflect whether or not the UV dose applied to disinfect water is sufficient to inactivate bacteria. Indeed, there is a bacterial mix in the UV-treated water: dead bacteria, viable and cultivable bacteria and viable but noncultivable bacteria (VBNC). The third type of bacteria can constitute a potential risk for public health. In fact, VBNC bacteria can be active and cause diseases. Consequently, the combination of a conventional method used to measure colony-forming ability after UV disinfection and the determination of adsorption constants of a lytic Qβ phage in relation to irradiated host cells by an increased UV dose ( Escherichia coli ATCC 13965) allows the detection of active bacteria, which lose their cultivability in usual growth media, but keep the phage susceptibility.

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          Most cited references15

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          Genome of the extremely radiation-resistant bacterium Deinococcus radiodurans viewed from the perspective of comparative genomics.

          The bacterium Deinococcus radiodurans shows remarkable resistance to a range of damage caused by ionizing radiation, desiccation, UV radiation, oxidizing agents, and electrophilic mutagens. D. radiodurans is best known for its extreme resistance to ionizing radiation; not only can it grow continuously in the presence of chronic radiation (6 kilorads/h), but also it can survive acute exposures to gamma radiation exceeding 1,500 kilorads without dying or undergoing induced mutation. These characteristics were the impetus for sequencing the genome of D. radiodurans and the ongoing development of its use for bioremediation of radioactive wastes. Although it is known that these multiple resistance phenotypes stem from efficient DNA repair processes, the mechanisms underlying these extraordinary repair capabilities remain poorly understood. In this work we present an extensive comparative sequence analysis of the Deinococcus genome. Deinococcus is the first representative with a completely sequenced genome from a distinct bacterial lineage of extremophiles, the Thermus-Deinococcus group. Phylogenetic tree analysis, combined with the identification of several synapomorphies between Thermus and Deinococcus, supports the hypothesis that it is an ancient group with no clear affinities to any of the other known bacterial lineages. Distinctive features of the Deinococcus genome as well as features shared with other free-living bacteria were revealed by comparison of its proteome to the collection of clusters of orthologous groups of proteins. Analysis of paralogs in Deinococcus has revealed several unique protein families. In addition, specific expansions of several other families including phosphatases, proteases, acyltransferases, and Nudix family pyrophosphohydrolases were detected. Genes that potentially affect DNA repair and recombination and stress responses were investigated in detail. Some proteins appear to have been horizontally transferred from eukaryotes and are not present in other bacteria. For example, three proteins homologous to plant desiccation resistance proteins were identified, and these are particularly interesting because of the correlation between desiccation and radiation resistance. Compared to other bacteria, the D. radiodurans genome is enriched in repetitive sequences, namely, IS-like transposons and small intergenic repeats. In combination, these observations suggest that several different biological mechanisms contribute to the multiple DNA repair-dependent phenotypes of this organism.
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            Resource-Limited Growth, Competition, and Predation: A Model and Experimental Studies with Bacteria and Bacteriophage

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              Bacteriophage latent-period evolution as a response to resource availability.

              Bacteriophages (phages) modify microbial communities by lysing hosts, transferring genetic material, and effecting lysogenic conversion. To understand how natural communities are affected it is important to develop predictive models. Here we consider how variation between models--in eclipse period, latent period, adsorption constant, burst size, the handling of differences in host quantity and host quality, and in modeling strategy--can affect predictions. First we compare two published models of phage growth, which differ primarily in terms of how they model the kinetics of phage adsorption; one is a computer simulation and the other is an explicit calculation. At higher host quantities (approximately 10(8) cells/ml), both models closely predict experimentally determined phage population growth rates. At lower host quantities (10(7) cells/ml), the computer simulation continues to closely predict phage growth rates, but the explicit model does not. Next we concentrate on predictions of latent-period optima. A latent-period optimum is the latent period that maximizes the population growth of a specific phage growing in the presence of a specific quantity and quality of host cells. Both models predict similar latent-period optima at higher host densities (e.g., 17 min at 10(8) cells/ml). At lower host densities, however, the computer simulation predicts latent-period optima that are much shorter than those suggested by explicit calculations (e.g., 90 versus 1,250 min at 10(5) cells/ml). Finally, we consider the impact of host quality on phage latent-period evolution. By taking care to differentiate latent-period phenotypic plasticity from latent-period evolution, we argue that the impact of host quality on phage latent-period evolution may be relatively small.
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                Author and article information

                Contributors
                myriam_rebia@yahoo.fr
                Journal
                Ann Microbiol
                Annals of Microbiology
                Springer-Verlag (Berlin/Heidelberg )
                1590-4261
                1869-2044
                6 February 2010
                6 February 2010
                March 2010
                : 60
                : 1
                : 121-127
                Affiliations
                [1 ]Water Treatment and Recycling Laboratory (LTRE), Water Research and Technologies Centre (CERTE), BP 273, 8020 Borj-Cedria, Tunis, Tunisia
                [2 ]Department of Human and Environment Sciences, Ochanomizu University, 2-1-1 Otsuka, Bunkyo-Ku, Tokyo, 112-8610 Japan
                Article
                17
                10.1007/s13213-010-0017-4
                2841757
                20351763
                f8e9cc1f-1c92-4574-b76b-8bf9f62fd8ab
                © The Author(s) 2010
                History
                : 9 October 2009
                : 28 December 2009
                Categories
                Original Article
                Custom metadata
                © Springer-Verlag and the University of Milan 2010

                Microbiology & Virology
                vbnc bacteria,uv-inactivation,active bacteria,lytic phage
                Microbiology & Virology
                vbnc bacteria, uv-inactivation, active bacteria, lytic phage

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