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      Silk Protein Solution: A Natural Example of Sticky Reptation

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          Abstract

          Silk is one of the most intriguing examples of biomolecular self-assembly, yet little is understood of molecular mechanisms behind the flow behavior generating these complex high-performance fibers. This work applies the polymer physics of entangled solution rheology to present a first microphysical understanding of silk in the linear viscoelastic regime. We show that silk solutions can be approximated as reptating polymers with “sticky” calcium bridges whose strength can be controlled through the potassium concentration. This approach provides a new window into critical microstructural parameters, in particular identifying the mechanism by which potassium and calcium ions are recruited as a powerful viscosity control in silk. Our model constitutes a viable starting point to understand not only the “flow-induced self-assembly” of silk fibers but also a broader range of phenomena in the emergent field of material-focused synthetic biology.

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          Most cited references27

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          Tube theory of entangled polymer dynamics

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            From the Cover: Charge interactions can dominate the dimensions of intrinsically disordered proteins.

            Many eukaryotic proteins are disordered under physiological conditions, and fold into ordered structures only on binding to their cellular targets. Such intrinsically disordered proteins (IDPs) often contain a large fraction of charged amino acids. Here, we use single-molecule Förster resonance energy transfer to investigate the influence of charged residues on the dimensions of unfolded and intrinsically disordered proteins. We find that, in contrast to the compact unfolded conformations that have been observed for many proteins at low denaturant concentration, IDPs can exhibit a prominent expansion at low ionic strength that correlates with their net charge. Charge-balanced polypeptides, however, can exhibit an additional collapse at low ionic strength, as predicted by polyampholyte theory from the attraction between opposite charges in the chain. The pronounced effect of charges on the dimensions of unfolded proteins has important implications for the cellular functions of IDPs.
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              Quantitative Theory for Linear Dynamics of Linear Entangled Polymers

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                Author and article information

                Journal
                Macromolecules
                Macromolecules
                ma
                mamobx
                Macromolecules
                American Chemical Society
                0024-9297
                1520-5835
                27 March 2020
                14 April 2020
                : 53
                : 7
                : 2669-2676
                Affiliations
                []Department of Physics, University of York , Heslington, York YO10 5DD, U.K.
                []Department of Materials Science and Engineering, The University of Sheffield , Sir Robert Hadfield Building, Mappin Street, Sheffield S1 3JD, U.K.
                Author notes
                Article
                10.1021/acs.macromol.9b02630
                7161084
                32308215
                fc46e362-2418-48ed-ad45-0d4229920ec9
                Copyright © 2020 American Chemical Society

                This is an open access article published under a Creative Commons Attribution (CC-BY) License, which permits unrestricted use, distribution and reproduction in any medium, provided the author and source are cited.

                History
                : 11 December 2019
                : 15 March 2020
                Categories
                Article
                Custom metadata
                ma9b02630
                ma9b02630

                Polymer chemistry
                Polymer chemistry

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