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      Feature selection methods for big data bioinformatics: A survey from the search perspective.

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          Abstract

          This paper surveys main principles of feature selection and their recent applications in big data bioinformatics. Instead of the commonly used categorization into filter, wrapper, and embedded approaches to feature selection, we formulate feature selection as a combinatorial optimization or search problem and categorize feature selection methods into exhaustive search, heuristic search, and hybrid methods, where heuristic search methods may further be categorized into those with or without data-distilled feature ranking measures.

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          Author and article information

          Journal
          Methods
          Methods (San Diego, Calif.)
          Elsevier BV
          1095-9130
          1046-2023
          Dec 01 2016
          : 111
          Affiliations
          [1 ] School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore. Electronic address: elpwang@ntu.edu.sg.
          [2 ] College of Information Engineering, Taiyuan University of Technology, Taiyuan, China. Electronic address: wangyaoli@tyut.edu.cn.
          [3 ] College of Information Engineering, Taiyuan University of Technology, Taiyuan, China. Electronic address: changqing@tyut.edu.cn.
          Article
          S1046-2023(16)30274-2
          10.1016/j.ymeth.2016.08.014
          27592382
          fec8783e-f76a-4ee8-a683-d62f10a5e36d
          History

          Support vector machines,Swarm intelligence,Classification,Clustering,Computational biology,Computational intelligence,Data mining,Evolutionary algorithms,Evolutionary computation,Fuzzy logic,Genetic algorithms,Machine learning,Microarray,Neural networks,Particle swarm optimization,Pattern recognition,Random forests,Rough sets,Soft computing,Biomarkers

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