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      Pseudomonas Inoculation Stimulates Endophytic Azospira Population and Induces Systemic Resistance to Bacterial Wilt

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          Abstract

          Bacterial communities in the rhizosphere play an important role in sustaining plant growth and the health of diverse soils. Recent studies have demonstrated that microbial keystone taxa in the rhizosphere microbial community are extremely critical for the suppression of diseases. However, the mechanisms involved in disease suppression by keystone species remain unclear. The present study assessed the effects of three Pseudomonas strains, which were identified as keystone species in our previous study, on the growth performance and root-associated bacterial community of tobacco plants. A high relative abundance of Ralstonia was found in the non-inoculated group, while a large Azospira population was observed in all groups inoculated with the three Pseudomonas strains. Correspondingly, the activities of the defense-related enzymes and the expression levels of the defense signaling marker genes of the plant were increased after inoculation with the Pseudomonas strains. Moreover, the correlation analyses showed that the relative abundance of Azospira, the activity of superoxide dismutase, catalase, and polyphenol oxidase, and the expression of H1N1, ACC Oxidase, and PR1 a/c had a significantly negative ( p<0.05) relationship with the abundance of Ralstonia. This further revealed that the keystone species, such as Pseudomonas spp., can suppress bacterial wilt disease by enhancing the systemic resistance of tobacco plants.

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          UPARSE: highly accurate OTU sequences from microbial amplicon reads.

          Amplified marker-gene sequences can be used to understand microbial community structure, but they suffer from a high level of sequencing and amplification artifacts. The UPARSE pipeline reports operational taxonomic unit (OTU) sequences with ≤1% incorrect bases in artificial microbial community tests, compared with >3% incorrect bases commonly reported by other methods. The improved accuracy results in far fewer OTUs, consistently closer to the expected number of species in a community.
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            The rhizosphere microbiome and plant health.

            The diversity of microbes associated with plant roots is enormous, in the order of tens of thousands of species. This complex plant-associated microbial community, also referred to as the second genome of the plant, is crucial for plant health. Recent advances in plant-microbe interactions research revealed that plants are able to shape their rhizosphere microbiome, as evidenced by the fact that different plant species host specific microbial communities when grown on the same soil. In this review, we discuss evidence that upon pathogen or insect attack, plants are able to recruit protective microorganisms, and enhance microbial activity to suppress pathogens in the rhizosphere. A comprehensive understanding of the mechanisms that govern selection and activity of microbial communities by plant roots will provide new opportunities to increase crop production. Copyright © 2012 Elsevier Ltd. All rights reserved.
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              Induced systemic resistance by beneficial microbes.

              Beneficial microbes in the microbiome of plant roots improve plant health. Induced systemic resistance (ISR) emerged as an important mechanism by which selected plant growth-promoting bacteria and fungi in the rhizosphere prime the whole plant body for enhanced defense against a broad range of pathogens and insect herbivores. A wide variety of root-associated mutualists, including Pseudomonas, Bacillus, Trichoderma, and mycorrhiza species sensitize the plant immune system for enhanced defense without directly activating costly defenses. This review focuses on molecular processes at the interface between plant roots and ISR-eliciting mutualists, and on the progress in our understanding of ISR signaling and systemic defense priming. The central role of the root-specific transcription factor MYB72 in the onset of ISR and the role of phytohormones and defense regulatory proteins in the expression of ISR in aboveground plant parts are highlighted. Finally, the ecological function of ISR-inducing microbes in the root microbiome is discussed.
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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                22 September 2021
                2021
                : 12
                : 738611
                Affiliations
                [1] 1 Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences , Qingdao, China
                [2] 2 Graduate School of Chinese Academy of Agricultural Sciences , Beijing, China
                [3] 3 Shanghai Tobacco Group Co., Ltd. , Shanghai, China
                [4] 4 Biological Organic Fertilizer Engineering Technology Center of China Tobacco, Zunyi Branch of Guizhou Tobacco Company , Zunyi, China
                Author notes

                Edited by: Maria Ludovica Saccà, Council for Agricultural and Economics Research (CREA), Italy

                Reviewed by: Kamal A. M. Abo-Elyousr, Assiut University, Egypt; Fengzhi Wu, Northeast Agricultural University, China

                *Correspondence: Yiqiang Li, liyiqiang@ 123456caas.cn

                These authors have contributed equally to this work

                This article was submitted to Plant Pathogen Interactions, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2021.738611
                9673043
                36406638
                010123cc-acaf-4312-bf94-64fc2acd5caa
                Copyright © 2021 Shang, Cai, Zhou, Han, Zhang, Ilyas, Li and Zheng.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 09 July 2021
                : 19 August 2021
                Page count
                Figures: 4, Tables: 3, Equations: 0, References: 51, Pages: 13, Words: 8644
                Funding
                Funded by: Science and Technology Project of Guizhou Tobacco Corporation
                Award ID: 201809
                Funded by: Agricultural Science and Technology Innovation Program of China
                Award ID: ASTIP-TRIC07
                Categories
                Plant Science
                Original Research

                Plant science & Botany
                soil-borne disease,rhizosphere microbiota,ralstonia solanacearum,microbial keystone taxa,systemic resistance

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