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      Primitive Extracellular Lipid Components on the Surface of the Charophytic Alga Klebsormidium flaccidum and Their Possible Biosynthetic Pathways as Deduced from the Genome Sequence

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          Abstract

          Klebsormidium flaccidum is a charophytic alga living in terrestrial and semiaquatic environments. K. flaccidum grows in various habitats, such as low-temperature areas and under desiccated conditions, because of its ability to tolerate harsh environments. Wax and cuticle polymers that contribute to the cuticle layer of plants are important for the survival of land plants, as they protect against those harsh environmental conditions and were probably critical for the transition from aquatic microorganism to land plants. Bryophytes, non-vascular land plants, have similar, but simpler, extracellular waxes and polyester backbones than those of vascular plants. The presence of waxes in terrestrial algae, especially in charophytes, which are the closest algae to land plants, could provide clues in elucidating the mechanism of land colonization by plants. Here, we compared genes involved in the lipid biosynthetic pathways of Arabidopsis thaliana to the K. flaccidum and the Chlamydomonas reinhardtii genomes, and identified wax-related genes in both algae. A simple and easy extraction method was developed for the recovery of the surface lipids from K. flaccidum and C. reinhardtii. Although these algae have wax components, their surface lipids were largely different from those of land plants. We also investigated aliphatic substances in the cell wall fraction of K. flaccidum and C. reinhardtii. Many of the fatty acids were determined to be lipophilic monomers in K. flaccidum, and a Fourier transform infrared spectroscopic analysis revealed that their possible binding mode was distinct from that of A. thaliana. Thus, we propose that K. flaccidum has a cuticle-like hydrophobic layer composed of lipids and glycoproteins, with a different composition from the cutin polymer typically found in land plant cuticles.

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          Most cited references71

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          A rapid method of total lipid extraction and purification.

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            Acyl-lipid metabolism.

            Acyl lipids in Arabidopsis and all other plants have a myriad of diverse functions. These include providing the core diffusion barrier of the membranes that separates cells and subcellular organelles. This function alone involves more than 10 membrane lipid classes, including the phospholipids, galactolipids, and sphingolipids, and within each class the variations in acyl chain composition expand the number of structures to several hundred possible molecular species. Acyl lipids in the form of triacylglycerol account for 35% of the weight of Arabidopsis seeds and represent their major form of carbon and energy storage. A layer of cutin and cuticular waxes that restricts the loss of water and provides protection from invasions by pathogens and other stresses covers the entire aerial surface of Arabidopsis. Similar functions are provided by suberin and its associated waxes that are localized in roots, seed coats, and abscission zones and are produced in response to wounding. This chapter focuses on the metabolic pathways that are associated with the biosynthesis and degradation of the acyl lipids mentioned above. These pathways, enzymes, and genes are also presented in detail in an associated website (ARALIP: http://aralip.plantbiology.msu.edu/). Protocols and methods used for analysis of Arabidopsis lipids are provided. Finally, a detailed summary of the composition of Arabidopsis lipids is provided in three figures and 15 tables.
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              Building lipid barriers: biosynthesis of cutin and suberin.

              Cutin and suberin are the polymer matrices for lipophilic cell wall barriers. These barriers control the fluxes of gases, water and solutes, and also play roles in protecting plants from biotic and abiotic stresses and in controlling plant morphology. Although they are ubiquitous, cutin and suberin are the least understood of the major plant extracellular polymers. The use of forward and reverse genetic approaches in Arabidopsis has led to the identification of oxidoreductase and acyltransferase genes involved in the biosynthesis of these polymers. However, major questions about the underlying polymer structure, biochemistry, and intracellular versus extracellular assembly remain to be resolved. The analysis of plant lines with modified cutins and suberins has begun to reveal the inter-relationships between the composition and function of these polymers.
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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                30 June 2016
                2016
                : 7
                : 952
                Affiliations
                [1] 1Graduate School of Bioscience and Biotechnology, Tokyo Institute of Technology Kanagawa, Japan
                [2] 2School of Life Science and Technology, Tokyo Institute of Technology Kanagawa, Japan
                [3] 3Core Research for Evolutional Science and Technology, Japan Science and Technology Agency Tokyo, Japan
                [4] 4The Earth-Life Science Institute, Tokyo Institute of Technology Tokyo, Japan
                [5] 5Advanced Course of Food and Nutrition, Nihon University Junior College Shizuoka, Japan
                Author notes

                Edited by: David Domozych, Skidmore College, USA

                Reviewed by: Mi Chung Suh, Chonnam National University, South Korea; Sandra Cristina Raimundo, Skidmore College, USA

                *Correspondence: Hiroyuki Ohta, ohta.h.ab@ 123456m.titech.ac.jp

                This article was submitted to Plant Evolution and Development, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2016.00952
                4927632
                27446179
                0757c10c-a3ba-4098-974a-4db27a6fd126
                Copyright © 2016 Kondo, Hori, Sasaki-Sekimoto, Kobayashi, Kato, Yuno-Ohta, Nobusawa, Ohtaka, Shimojima and Ohta.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 24 March 2016
                : 15 June 2016
                Page count
                Figures: 11, Tables: 0, Equations: 0, References: 82, Pages: 15, Words: 0
                Categories
                Plant Science
                Original Research

                Plant science & Botany
                klebsormidium flaccidum,chlamydomonas reinhardtii,arabidopsis thaliana,extracellular lipids,polyester backbone,wax,cuticle

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