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      Population structure in Atlantic cod in the eastern North Sea-Skagerrak-Kattegat: early life stage dispersal and adult migration

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          Abstract

          Background

          In marine fish species, where pelagic egg and larvae drift with ocean currents, population structure has been suggested to be maintained by larval retention due to hydrographic structuring and by homing of adult fish to natal areas. Whilst natal homing of adults has been demonstrated for anadromous and coral reef fishes, there are few documented examples of philopatric migration in temperate marine fish species.

          Results

          Here, we demonstrate temporally stable genetic differentiation among spawning populations of Atlantic cod ( Gadus morhua L.), and present genetic and behavioural evidence for larval drift and philopatric migration in the eastern North Sea-Skagerrak-Kattegat area. We show that juvenile cod collected in the eastern Skagerrak and central Kattegat are genetically similar to cod from offshore spawning areas in the eastern North Sea. Genetic assignment of individual 2–5 year old fish indicates that cod residing at, or migrating towards, spawning areas in Kattegat and the North Sea display philopatric behaviours.

          Conclusions

          Together these findings suggest a loop between spawning, larval drift and adult return-migrations to spawning areas and underlines that both oceanographic processes and migratory behaviour in the adult phase may be important for stock separation and integrity in marine temperate fishes such as Atlantic cod.

          Electronic supplementary material

          The online version of this article (doi:10.1186/s13104-016-1878-9) contains supplementary material, which is available to authorized users.

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          Most cited references77

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          Genetic assignment methods for the direct, real-time estimation of migration rate: a simulation-based exploration of accuracy and power.

          Genetic assignment methods use genotype likelihoods to draw inference about where individuals were or were not born, potentially allowing direct, real-time estimates of dispersal. We used simulated data sets to test the power and accuracy of Monte Carlo resampling methods in generating statistical thresholds for identifying F0 immigrants in populations with ongoing gene flow, and hence for providing direct, real-time estimates of migration rates. The identification of accurate critical values required that resampling methods preserved the linkage disequilibrium deriving from recent generations of immigrants and reflected the sampling variance present in the data set being analysed. A novel Monte Carlo resampling method taking into account these aspects was proposed and its efficiency was evaluated. Power and error were relatively insensitive to the frequency assumed for missing alleles. Power to identify F0 immigrants was improved by using large sample size (up to about 50 individuals) and by sampling all populations from which migrants may have originated. A combination of plotting genotype likelihoods and calculating mean genotype likelihood ratios (DLR) appeared to be an effective way to predict whether F0 immigrants could be identified for a particular pair of populations using a given set of markers.
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            Local replenishment of coral reef fish populations in a marine reserve.

            The scale of larval dispersal of marine organisms is important for the design of networks of marine protected areas. We examined the fate of coral reef fish larvae produced at a small island reserve, using a mass-marking method based on maternal transmission of stable isotopes to offspring. Approximately 60% of settled juveniles were spawned at the island, for species with both short ( 1 month) pelagic larval durations. If natal homing of larvae is a common life-history strategy, the appropriate spatial scales for the management and conservation of coral reefs are likely to be much smaller than previously assumed.
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              Coral reef fish larvae settle close to home.

              Population connectivity through larval dispersal is an essential parameter in models of marine population dynamics and the optimal size and spacing of marine reserves. However, there are remarkably few direct estimates of larval dispersal for marine organisms, and the actual birth sites of successful recruits have never been located. Here, we solve the mystery of the natal origin of clownfish (Amphiprion polymnus) juveniles by mass-marking via tetracycline immersion all larvae produced in a population. In addition, we established parentage by DNA genotyping all potential adults and all new recruits arriving in the population. Although no individuals settled into the same anemone as their parents, many settled remarkably close to home. Even though this species has a 9-12 day larval duration, one-third of settled juveniles had returned to a 2 hectare natal area, with many settling <100 m from their birth site. This represents the smallest scale of dispersal known for any marine fish species with a pelagic larval phase. The degree of local retention indicates that marine reserves can provide recruitment benefits not only beyond but also within their boundaries.
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                Author and article information

                Contributors
                0046705216295 , carl.andre@gu.se
                henrik.svedang@slu.se
                halvor.knutsen@imr.no
                geir.dahle@imr.no
                patrik.jonsson@slu.se
                anna-karin.ring@marine.gu.se
                mattias.skold@slu.se
                p.e.jorde@ibv.uio.no
                Journal
                BMC Res Notes
                BMC Res Notes
                BMC Research Notes
                BioMed Central (London )
                1756-0500
                3 February 2016
                3 February 2016
                2016
                : 9
                : 63
                Affiliations
                [ ]Department of Marine Sciences-Tjärnö, University of Gothenburg, 452 96 Strömstad, Sweden
                [ ]Department of Aquatic Resources, Institute of Marine Research, Swedish University of Agricultural Sciences, 453 21 Lysekil, Sweden
                [ ]Institute of Marine Research, Flødevigen, 4817 His, Norway
                [ ]Institute of Marine Research, PO Box, 1870, 5817 Nordnes, Bergen, Norway
                [ ]Department of Biosciences, Centre for Ecological and Evolutionary Synthesis, University of Oslo, P.O. Box 1066, Blindern, 0316 Oslo, Norway
                [ ]University of Agder, 4604 Kristiansand, Norway
                Article
                1878
                10.1186/s13104-016-1878-9
                4739106
                26843185
                149160bd-4682-4a1c-8070-c849cb227691
                © André et al. 2016

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 18 April 2015
                : 20 January 2016
                Categories
                Research Article
                Custom metadata
                © The Author(s) 2016

                Medicine
                gadus morhua,larval drift,philopatric behaviour,population structure,stock,connectivity,genetic assignment

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