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      Somatic Mosaicism of a PDGFRB Activating Variant in Aneurysms of the Intracranial, Coronary, Aortic, and Radial Artery Vascular Beds

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          Abstract

          Background

          Activating variants in platelet‐derived growth factor receptor beta (PDGFRB), including a variant we have previously described (p.Tyr562Cys [g.149505130T>C [GRCh37/hg19]; c.1685A>G]), are associated with development of multiorgan pathology, including aneurysm formation. To investigate the association between the allele fraction genotype and histopathologic phenotype, we performed an expanded evaluation of post‐mortem normal and aneurysmal tissue specimens from the previously published index patient.

          Methods and Results

          Following death due to diffuse subarachnoid hemorrhage in a patient with mosaic expression of the above PDGFRB variant, specimens from the intracranial, coronary, radial and aortic arteries were harvested. DNA was extracted and alternate allele fractions (AAF) of PDGFRB were determined using digital droplet PCR. Radiographic and histopathologic findings, together with genotype expression of PDGFRB were then correlated in aneurysmal tissue and compared to non‐aneurysmal tissue. The PDGFRB variant was identified in the vertebral artery, basilar artery, and P1 segment aneurysms (AAF: 28.7%, 16.4%, and 17.8%, respectively). It was also identified in the coronary and radial artery aneurysms (AAF: 22.3% and 20.6%, respectively). In phenotypically normal intracranial and coronary artery tissues, the PDGFRB variant was not present. The PDGFRB variant was absent from lymphocyte DNA and normal tissue, confirming it to be a non‐germline somatic variant. Primary cell cultures from a radial artery aneurysm localized the PDGFRB variant to CD31‐, non‐endothelial cells.

          Conclusions

          Constitutive expression of PDGFRB within the arterial wall is associated with the development of human fusiform aneurysms. The role of targeted therapy with tyrosine kinase inhibitors in fusiform aneurysms with PDGFRB mutations should be further studied.

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          Most cited references34

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          High-Throughput Droplet Digital PCR System for Absolute Quantitation of DNA Copy Number

          Digital PCR enables the absolute quantitation of nucleic acids in a sample. The lack of scalable and practical technologies for digital PCR implementation has hampered the widespread adoption of this inherently powerful technique. Here we describe a high-throughput droplet digital PCR (ddPCR) system that enables processing of ∼2 million PCR reactions using conventional TaqMan assays with a 96-well plate workflow. Three applications demonstrate that the massive partitioning afforded by our ddPCR system provides orders of magnitude more precision and sensitivity than real-time PCR. First, we show the accurate measurement of germline copy number variation. Second, for rare alleles, we show sensitive detection of mutant DNA in a 100 000-fold excess of wildtype background. Third, we demonstrate absolute quantitation of circulating fetal and maternal DNA from cell-free plasma. We anticipate this ddPCR system will allow researchers to explore complex genetic landscapes, discover and validate new disease associations, and define a new era of molecular diagnostics.
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            Molecular mechanisms of antibody somatic hypermutation.

            Functional antibody genes are assembled by V-D-J joining and then diversified by somatic hypermutation. This hypermutation results from stepwise incorporation of single nucleotide substitutions into the V gene, underpinning much of antibody diversity and affinity maturation. Hypermutation is triggered by activation-induced deaminase (AID), an enzyme which catalyzes targeted deamination of deoxycytidine residues in DNA. The pathways used for processing the AID-generated U:G lesions determine the variety of base substitutions observed during somatic hypermutation. Thus, DNA replication across the uracil yields transition mutations at C:G pairs, whereas uracil excision by UNG uracil-DNA glycosylase creates abasic sites that can also yield transversions. Recognition of the U:G mismatch by MSH2/MSH6 triggers a mutagenic patch repair in which polymerase eta plays a major role and leads to mutations at A:T pairs. AID-triggered DNA deamination also underpins immunoglobulin variable (IgV) gene conversion, isotype class switching, and some oncogenic translocations in B cell tumors.
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              VEGF guides angiogenic sprouting utilizing endothelial tip cell filopodia

              Vascular endothelial growth factor (VEGF-A) is a major regulator of blood vessel formation and function. It controls several processes in endothelial cells, such as proliferation, survival, and migration, but it is not known how these are coordinately regulated to result in more complex morphogenetic events, such as tubular sprouting, fusion, and network formation. We show here that VEGF-A controls angiogenic sprouting in the early postnatal retina by guiding filopodial extension from specialized endothelial cells situated at the tips of the vascular sprouts. The tip cells respond to VEGF-A only by guided migration; the proliferative response to VEGF-A occurs in the sprout stalks. These two cellular responses are both mediated by agonistic activity of VEGF-A on VEGF receptor 2. Whereas tip cell migration depends on a gradient of VEGF-A, proliferation is regulated by its concentration. Thus, vessel patterning during retinal angiogenesis depends on the balance between two different qualities of the extracellular VEGF-A distribution, which regulate distinct cellular responses in defined populations of endothelial cells.
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                Author and article information

                Contributors
                manuelf3@uw.edu
                Journal
                J Am Heart Assoc
                J Am Heart Assoc
                10.1002/(ISSN)2047-9980
                JAH3
                ahaoa
                Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease
                John Wiley and Sons Inc. (Hoboken )
                2047-9980
                12 February 2022
                15 February 2022
                : 11
                : 4 ( doiID: 10.1002/jah3.v11.4 )
                : e024289
                Affiliations
                [ 1 ] Departments of Neurosurgery University of Washington School of Medicine University of Washington Medical Center Seattle WA
                [ 2 ] Division of Neuropathology Department of Laboratory Medicine and Pathology University of Washington School of Medicine Harborview Medical Center Seattle WA
                [ 3 ] Departments of Genome Sciences University of Washington School of Medicine University of Washington Medical Center Seattle WA
                [ 4 ] Division of Vascular Surgery University of Washington School of Medicine University of Washington Medical Center Seattle WA
                Author notes
                [*] [* ] Correspondence to: Manuel Ferreira, Jr., MD, PhD, University of Washington School of Medicine, Department of Neurological Surgery, 1959 NE Pacific St., Seattle, Washington. E‐mail: manuelf3@ 123456uw.edu

                [ * ]

                C. A. Parada, F. M. El‐Ghazali, and D. Toglia contributed equally.

                Author information
                https://orcid.org/0000-0002-0692-4605
                https://orcid.org/0000-0002-8501-2750
                https://orcid.org/0000-0002-2601-6276
                https://orcid.org/0000-0002-8424-8331
                https://orcid.org/0000-0002-1720-7441
                Article
                JAH37178
                10.1161/JAHA.121.024289
                9245804
                35156398
                1602f5c1-8a39-486e-a499-a91f1fc29386
                © 2022 The Authors. Published on behalf of the American Heart Association, Inc., by Wiley.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 20 October 2021
                : 06 January 2022
                Page count
                Figures: 3, Tables: 0, Pages: 9, Words: 6153
                Funding
                Funded by: National Institutes of Health , doi 10.13039/100000002;
                Award ID: 1RO1HL103996
                Categories
                Original Research
                Original Research
                Genetics
                Custom metadata
                2.0
                February 15, 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.1.7 mode:remove_FC converted:28.06.2022

                Cardiovascular Medicine
                cerebral aneurysm,fusiform,mosaic,pdgfrb,translational studies,pathophysiology,aneurysm,functional genomics

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