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      A Single-Culture Bioprocess of Methanothermobacter thermautotrophicus to Upgrade Digester Biogas by CO 2 -to-CH 4 Conversion with H 2

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          Abstract

          We optimized and tested a postbioprocessing step with a single-culture archaeon to upgrade biogas (i.e., increase methane content) from anaerobic digesters via conversion of CO 2 into CH 4 by feeding H 2 gas. We optimized a culture of the thermophilic methanogen Methanothermobacter thermautotrophicus using: (1) a synthetic H 2/CO 2 mixture; (2) the same mixture with pressurization; (3) a synthetic biogas with different CH 4 contents and H 2; and (4) an industrial, untreated biogas and H 2. A laboratory culture with a robust growth (dry weight of 6.4–7.4 g/L; OD 600 of 13.6–15.4), a volumetric methane production rate of 21 L/L culture-day, and a H 2 conversion efficiency of 89% was moved to an industrial anaerobic digester facility, where it was restarted and fed untreated biogas with a methane content of ~70% at a rate such that CO 2 was in excess of the stoichiometric requirements in relation to H 2. Over an 8-day operating period, the dry weight of the culture initially decreased slightly before stabilizing at an elevated level of ~8 g/L to achieve a volumetric methane production rate of 21 L/L culture-day and a H 2 conversion efficiency of 62%. While some microbial contamination of the culture was observed via microscopy, it did not affect the methane production rate of the culture.

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          Production of bioenergy and biochemicals from industrial and agricultural wastewater.

          The building of a sustainable society will require reduction of dependency on fossil fuels and lowering of the amount of pollution that is generated. Wastewater treatment is an area in which these two goals can be addressed simultaneously. As a result, there has been a paradigm shift recently, from disposing of waste to using it. There are several biological processing strategies that produce bioenergy or biochemicals while treating industrial and agricultural wastewater, including methanogenic anaerobic digestion, biological hydrogen production, microbial fuel cells and fermentation for production of valuable products. However, there are also scientific and technical barriers to the implementation of these strategies.
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            Complete genome sequence of Methanobacterium thermoautotrophicum deltaH: functional analysis and comparative genomics.

            The complete 1,751,377-bp sequence of the genome of the thermophilic archaeon Methanobacterium thermoautotrophicum deltaH has been determined by a whole-genome shotgun sequencing approach. A total of 1,855 open reading frames (ORFs) have been identified that appear to encode polypeptides, 844 (46%) of which have been assigned putative functions based on their similarities to database sequences with assigned functions. A total of 514 (28%) of the ORF-encoded polypeptides are related to sequences with unknown functions, and 496 (27%) have little or no homology to sequences in public databases. Comparisons with Eucarya-, Bacteria-, and Archaea-specific databases reveal that 1,013 of the putative gene products (54%) are most similar to polypeptide sequences described previously for other organisms in the domain Archaea. Comparisons with the Methanococcus jannaschii genome data underline the extensive divergence that has occurred between these two methanogens; only 352 (19%) of M. thermoautotrophicum ORFs encode sequences that are >50% identical to M. jannaschii polypeptides, and there is little conservation in the relative locations of orthologous genes. When the M. thermoautotrophicum ORFs are compared to sequences from only the eucaryal and bacterial domains, 786 (42%) are more similar to bacterial sequences and 241 (13%) are more similar to eucaryal sequences. The bacterial domain-like gene products include the majority of those predicted to be involved in cofactor and small molecule biosyntheses, intermediary metabolism, transport, nitrogen fixation, regulatory functions, and interactions with the environment. Most proteins predicted to be involved in DNA metabolism, transcription, and translation are more similar to eucaryal sequences. Gene structure and organization have features that are typical of the Bacteria, including genes that encode polypeptides closely related to eucaryal proteins. There are 24 polypeptides that could form two-component sensor kinase-response regulator systems and homologs of the bacterial Hsp70-response proteins DnaK and DnaJ, which are notably absent in M. jannaschii. DNA replication initiation and chromosome packaging in M. thermoautotrophicum are predicted to have eucaryal features, based on the presence of two Cdc6 homologs and three histones; however, the presence of an ftsZ gene indicates a bacterial type of cell division initiation. The DNA polymerases include an X-family repair type and an unusual archaeal B type formed by two separate polypeptides. The DNA-dependent RNA polymerase (RNAP) subunits A', A", B', B" and H are encoded in a typical archaeal RNAP operon, although a second A' subunit-encoding gene is present at a remote location. There are two rRNA operons, and 39 tRNA genes are dispersed around the genome, although most of these occur in clusters. Three of the tRNA genes have introns, including the tRNAPro (GGG) gene, which contains a second intron at an unprecedented location. There is no selenocysteinyl-tRNA gene nor evidence for classically organized IS elements, prophages, or plasmids. The genome contains one intein and two extended repeats (3.6 and 8.6 kb) that are members of a family with 18 representatives in the M. jannaschii genome.
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              Evaluation of energy efficiency of various biogas production and utilization pathways

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                Author and article information

                Journal
                Archaea
                Archaea
                ARCH
                Archaea
                Hindawi Publishing Corporation
                1472-3646
                1472-3654
                2013
                2013
                1 October 2013
                : 2013
                : 157529
                Affiliations
                1Electrochaea, LLC, 1005 N. Warson Road, Suite 201, St. Louis, MO 63132, USA
                2The University of Chicago, 920 E. 58th Street, Chicago, IL 60637, USA
                3Cornell University, 214 Riley-Robb Hall, Ithaca, NY 14853, USA
                Author notes
                *Largus T. Angenent: la249@ 123456cornell.edu

                Academic Editor: Alfons J. M. Stams

                Author information
                http://orcid.org/0000-0001-6562-1148
                http://orcid.org/0000-0003-4764-114X
                Article
                10.1155/2013/157529
                3806361
                24194675
                198b1af1-5078-4a6e-9bc4-95ee060e6872
                Copyright © 2013 Matthew R. Martin et al.

                This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 31 May 2013
                : 20 August 2013
                : 21 August 2013
                Categories
                Research Article

                Animal science & Zoology
                Animal science & Zoology

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