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      Metabolic pathway engineering using the central signal processor P II

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          Abstract

          Background

          P II signal processor proteins are wide spread in prokaryotes and plants where they control a multitude of anabolic reactions. Efficient overproduction of metabolites requires relaxing the tight cellular control circuits. Here we demonstrate that a single point mutation in the P II signaling protein from the cyanobacterium Synechocystis sp. PCC 6803 is sufficient to unlock the arginine pathway causing over accumulation of the biopolymer cyanophycin (multi- l-arginyl-poly- l-aspartate). This product is of biotechnological interest as a source of amino acids and polyaspartic acid. This work exemplifies a novel approach of pathway engineering by designing custom-tailored P II signaling proteins. Here, the engineered Synechocystis sp. PCC6803 strain with a P II-I86N mutation over-accumulated arginine through constitutive activation of the key enzyme N-acetylglutamate kinase (NAGK).

          Results

          In the engineered strain BW86, in vivo NAGK activity was strongly increased and led to a more than tenfold higher arginine content than in the wild-type. As a consequence, strain BW86 accumulated up to 57 % cyanophycin per cell dry mass under the tested conditions, which is the highest yield of cyanophycin reported to date. Strain BW86 produced cyanophycin in a molecular mass range of 25 to >100 kDa; the wild-type produced the polymer in a range of 30 to >100 kDa.

          Conclusions

          The high yield and high molecular mass of cyanophycin produced by strain BW86 along with the low nutrient requirements of cyanobacteria make it a promising means for the biotechnological production of cyanophycin. This study furthermore demonstrates the feasibility of metabolic pathway engineering using the P II signaling protein, which occurs in numerous bacterial species.

          Electronic supplementary material

          The online version of this article (doi:10.1186/s12934-015-0384-4) contains supplementary material, which is available to authorized users.

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          Most cited references43

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          Molecular Cloning : A Laboratory Manual

          <p>The first two editions of this manual have been mainstays of molecular biology for nearly twenty years, with an unrivalled reputation for reliability, accuracy, and clarity.<br>In this new edition, authors Joseph Sambrook and David Russell have completely updated the book, revising every protocol and adding a mass of new material, to broaden its scope and maintain its unbeatable value for studies in genetics, molecular cell biology, developmental biology, microbiology, neuroscience, and immunology.<br>Handsomely redesigned and presented in new bindings of proven durability, this three–volume work is essential for everyone using today’s biomolecular techniques.<br>The opening chapters describe essential techniques, some well–established, some new, that are used every day in the best laboratories for isolating, analyzing and cloning DNA molecules, both large and small.<br>These are followed by chapters on cDNA cloning and exon trapping, amplification of DNA, generation and use of nucleic acid probes, mutagenesis, and DNA sequencing.<br>The concluding chapters deal with methods to screen expression libraries, express cloned genes in both prokaryotes and eukaryotic cells, analyze transcripts and proteins, and detect protein–protein interactions.<br>The Appendix is a compendium of reagents, vectors, media, technical suppliers, kits, electronic resources and other essential information.<br>As in earlier editions, this is the only manual that explains how to achieve success in cloning and provides a wealth of information about why techniques work, how they were first developed, and how they have evolved. </p>
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            P(II) signal transducers: novel functional and structural insights.

            The P(II) signal transduction proteins have key functions in coordinating the regulation of central metabolic processes. Signals from the carbon, nitrogen and energy status of the cells are converted into different conformational (and modification) states of the P(II) proteins. Depending on these states, the P(II) proteins interact with various target proteins, most of which perform or regulate crucial reactions in nitrogen assimilatory pathways. This review presents recent progress in the elucidation of novel P(II) functions and in gaining novel structural insights into how the signals convert the P(II) states and how the activity of targets is affected by P(II) interaction.
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              N-acetylglutamate and its changing role through evolution.

              N -Acetylglutamate (NAG) fulfils distinct biological roles in lower and higher organisms. In prokaryotes, lower eukaryotes and plants it is the first intermediate in the biosynthesis of arginine, whereas in ureotelic (excreting nitrogen mostly in the form of urea) vertebrates, it is an essential allosteric cofactor for carbamyl phosphate synthetase I (CPSI), the first enzyme of the urea cycle. The pathway that leads from glutamate to arginine in lower organisms employs eight steps, starting with the acetylation of glutamate to form NAG. In these species, NAG can be produced by two enzymic reactions: one catalysed by NAG synthase (NAGS) and the other by ornithine acetyltransferase (OAT). In ureotelic species, NAG is produced exclusively by NAGS. In lower organisms, NAGS is feedback-inhibited by L-arginine, whereas mammalian NAGS activity is significantly enhanced by this amino acid. The NAGS genes of bacteria, fungi and mammals are more diverse than other arginine-biosynthesis and urea-cycle genes. The evolutionary relationship between the distinctly different roles of NAG and its metabolism in lower and higher organisms remains to be determined. In humans, inherited NAGS deficiency is an autosomal recessive disorder causing hyperammonaemia and a phenotype similar to CPSI deficiency. Several mutations have been recently identified in the NAGS genes of families affected with this disorder.
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                Author and article information

                Contributors
                bjoern.watzer@student.uni-tuebingen.de
                alicia.engelbrecht@student.uni-tuebingen.de
                waldemar.hauf@gmail.com
                mark.stahl@zmbp.uni-tuebingen.de
                iris.maldener@mikrobio.uni-tuebingen.de
                karl.forchhammer@uni-tuebingen.de
                Journal
                Microb Cell Fact
                Microb. Cell Fact
                Microbial Cell Factories
                BioMed Central (London )
                1475-2859
                25 November 2015
                25 November 2015
                2015
                : 14
                : 192
                Affiliations
                [ ]Interfaculty Institute of Microbiology and Infection Medicine Tübingen, Eberhard-Karls-Universität Tübingen, Auf der Morgenstelle 28, 72076 Tübingen, Germany
                [ ]Central Facilities, Analytics, ZMBP, Eberhard-Karls-Universität Tübingen, Auf der Morgenstelle 32, 72076 Tübingen, Germany
                Article
                384
                10.1186/s12934-015-0384-4
                4660640
                26608263
                254eacac-df21-4836-8df7-b66521f5957c
                © Watzer et al. 2015

                Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

                History
                : 28 July 2015
                : 6 November 2015
                Categories
                Research
                Custom metadata
                © The Author(s) 2015

                Biotechnology
                cyanophycin,cyanobacteria,l-arginine,pii protein
                Biotechnology
                cyanophycin, cyanobacteria, l-arginine, pii protein

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