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      Metagenomic Analysis of Airborne Bacterial Community and Diversity in Seoul, Korea, during December 2014, Asian Dust Event

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          Abstract

          Asian dust or yellow sand events in East Asia are a major issue of environmental contamination and human health, causing increasing concern. A high amount of dust particles, especially called as particulate matter 10 (PM10), is transported by the wind from the arid and semi-arid tracks to the Korean peninsula, bringing a bacterial population that alters the terrestrial and atmospheric microbial communities. In this study, we aimed to explore the bacterial populations of Asian dust samples collected during November–December 2014. The dust samples were collected using the impinger method, and the hypervariable regions of the 16S rRNA gene were amplified using PCR followed by pyrosequencing. Analysis of the sequencing data were performed using Mothur software. The data showed that the number of operational taxonomic units and diversity index during Asian dust events were higher than those during non-Asian dust events. At the phylum level, the proportions of Proteobacteria, Actinobacteria, and Firmicutes were different between Asian dust and non-Asian dust samples. At the genus level, the proportions of the genus Bacillus (6.9%), Arthrobacter (3.6%), Blastocatella (2%), Planomicrobium (1.4%) were increased during Asian dust compared to those in non-Asian dust samples. This study showed that the significant relationship between bacterial populations of Asian dust samples and non-Asian dust samples in Korea, which could significantly affect the microbial population in the environment.

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          Most cited references16

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          Long-range atmospheric transport of soil dust from Asia to the tropical north pacific: temporal variability.

          The concentration of airborne soil dust at Enewetak Atoll(11 degrees N, 162 degrees E) in April 1979 was 2.3 micrograms per cubic meter but decreased steadily to 0.02 microgram per cubic meter over the next 5 months. The spring dust is probably derived from China; its deposition rate ( approximately 0.3 millimeter per 1000 years) suggests that it may be a significant contributor to the deep-sea sediments of the North Pacific.
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            Aerobiology and the global transport of desert dust.

            Desert winds aerosolize several billion tons of soil-derived dust each year, including concentrated seasonal pulses from Africa and Asia. These transoceanic and transcontinental dust events inject a large pulse of microorganisms and pollen into the atmosphere and could therefore have a role in transporting pathogens or expanding the biogeographical range of some organisms by facilitating long-distance dispersal events. As we discuss here, whether such dispersal events are occurring is only now beginning to be investigated. Huge dust events create an atmospheric bridge over land and sea, and the microbiota contained within them could impact downwind ecosystems. Such dispersal is of interest because of the possible health effects of allergens and pathogens that might be carried with the dust.
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              Anthrax.

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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                25 January 2017
                2017
                : 12
                : 1
                : e0170693
                Affiliations
                [1 ]Department of Life Science, Dongguk University-Seoul, Goyang, South Korea
                [2 ]Department of Bio & Environmental Technology, Division of Environmental & Life Science, College of Natural Science, Seoul Women’s University, Seoul, South Korea
                [3 ]Biosafety Research Team, Environmental Health Research Department, National Institute of Environmental Research, Incheon, South Korea
                [4 ]Air Quality Research Division, Climate and Air Quality Research Department, National Institute of Environmental Research, Incheon, South Korea
                [5 ]Water Supply and Sewerage Research Division, Environmental Infrastructure Research Department, National Institute of Environmental Research, Incheon, South Korea
                [6 ]Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, South Korea
                AC Camargo Cancer Hospital, BRAZIL
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                • Conceptualization: SC MK TS.

                • Data curation: SC SS JJ DL SL KK MK TS.

                • Formal analysis: SC KK MK TS.

                • Funding acquisition: TS.

                • Investigation: SC MK TS.

                • Methodology: SC SS TS.

                • Project administration: MK TS.

                • Resources: WJ DL EP JC HC MK TS.

                • Software: SC KK.

                • Supervision: MK TS.

                • Validation: TS.

                • Visualization: SC TS.

                • Writing – original draft: SC.

                • Writing – review & editing: TS.

                Article
                PONE-D-16-23130
                10.1371/journal.pone.0170693
                5266312
                28122054
                27fb4982-5624-452b-a010-acb77c0c89c3
                © 2017 Cha et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 8 June 2016
                : 9 January 2017
                Page count
                Figures: 4, Tables: 4, Pages: 12
                Funding
                Funded by: National Institute of Environmental Research
                Award Recipient :
                This work was supported by the National Institute of Environmental Research, Republic of Korea. The funder had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Physical Sciences
                Materials Science
                Materials by Structure
                Dust
                Biology and Life Sciences
                Organisms
                Bacteria
                Biology and Life Sciences
                Organisms
                Bacteria
                Actinobacteria
                Biology and Life Sciences
                Organisms
                Bacteria
                Bacillus
                Biology and Life Sciences
                Microbiology
                Medical Microbiology
                Microbial Pathogens
                Bacterial Pathogens
                Bacillus
                Medicine and Health Sciences
                Pathology and Laboratory Medicine
                Pathogens
                Microbial Pathogens
                Bacterial Pathogens
                Bacillus
                Biology and Life Sciences
                Ecology
                Ecological Metrics
                Species Diversity
                Simpson Index
                Ecology and Environmental Sciences
                Ecology
                Ecological Metrics
                Species Diversity
                Simpson Index
                Biology and life sciences
                Biochemistry
                Nucleic acids
                RNA
                Non-coding RNA
                Ribosomal RNA
                Biology and life sciences
                Biochemistry
                Ribosomes
                Ribosomal RNA
                Biology and life sciences
                Cell biology
                Cellular structures and organelles
                Ribosomes
                Ribosomal RNA
                Biology and Life Sciences
                Organisms
                Bacteria
                Actinobacteria
                Arthrobacter
                Biology and Life Sciences
                Microbiology
                Bacteriology
                Bacterial Taxonomy
                Biology and Life Sciences
                Taxonomy
                Microbial Taxonomy
                Bacterial Taxonomy
                Computer and Information Sciences
                Data Management
                Taxonomy
                Microbial Taxonomy
                Bacterial Taxonomy
                Custom metadata
                All relevant data are within the paper and its Supporting Information files.

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                Uncategorized

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