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      Modelling exposure heterogeneity and density dependence in onchocerciasis using a novel individual-based transmission model, EPIONCHO-IBM: Implications for elimination and data needs

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          Abstract

          Background

          Density dependence in helminth establishment and heterogeneity in exposure to infection are known to drive resilience to interventions based on mass drug administration (MDA). However, the interaction between these processes is poorly understood. We developed a novel individual-based model for onchocerciasis transmission, EPIONCHO-IBM, which accounts for both processes. We fit the model to pre-intervention epidemiological data and explore parasite dynamics during MDA with ivermectin.

          Methodology/Principal findings

          Density dependence and heterogeneity in exposure to blackfly (vector) bites were estimated by fitting the model to matched pre-intervention microfilarial prevalence, microfilarial intensity and vector biting rate data from savannah areas of Cameroon and Côte d’Ivoire/Burkina Faso using Latin hypercube sampling. Transmission dynamics during 25 years of annual and biannual ivermectin MDA were investigated. Density dependence in parasite establishment within humans was estimated for different levels of (fixed) exposure heterogeneity to understand how parametric uncertainty may influence treatment dynamics. Stronger overdispersion in exposure to blackfly bites results in the estimation of stronger density-dependent parasite establishment within humans, consequently increasing resilience to MDA. For all levels of exposure heterogeneity tested, the model predicts a departure from the functional forms for density dependence assumed in the deterministic version of the model.

          Conclusions/Significance

          This is the first, stochastic model of onchocerciasis, that accounts for and estimates density-dependent parasite establishment in humans alongside exposure heterogeneity. Capturing the interaction between these processes is fundamental to our understanding of resilience to MDA interventions. Given that uncertainty in these processes results in very different treatment dynamics, collecting data on exposure heterogeneity would be essential for improving model predictions during MDA. We discuss possible ways in which such data may be collected as well as the importance of better understanding the effects of immunological responses on establishing parasites prior to and during ivermectin treatment.

          Author summary

          Onchocerciasis, caused by the helminth parasite Onchocerca volvulus, is transmitted via the bites of Simulium blackflies. The World Health Organization has proposed onchocerciasis elimination in African countries by 2020/2025. Processes regulating parasite abundance in the lifecycle of helminths are known to influence the endemic prevalence in mathematical models. For example, when transmission intensity is low, a high proportion of incoming parasites may establish within a human host, whilst the opposite may be true when transmission intensity is high, possibly due to immunological processes. These processes may interact with exposure as some people are bitten more than others and receive more parasites. Therefore, regulatory processes that depend on parasite density and inter-individual variation in exposure play a central role in the ability of transmission to bounce back following mass drug administration. The former, because they may increase the success of parasite establishment as treatment progresses; the latter, because a few highly infected individuals may maintain transmission. We developed an individual-based model for onchocerciasis transmission and show that the interaction between these two processes impacts treatment outcomes. We highlight the need to obtain data on exposure to vector bites and to understand how immunological processes potentially regulating parasite establishment change under treatment.

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          Most cited references71

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          The Use of Confidence or Fiducial Limits Illustrated in the Case of the Binomial

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            Effect of single-dose ivermectin on Onchocerca volvulus: a systematic review and meta-analysis.

            The broad-spectrum antiparasitic drug ivermectin was licensed for use against onchocerciasis in 1987, yet the mechanisms by which it exerts a fast decrease and long-lasting suppression of Onchocerca volvulus microfilaridermia, and inhibition of microfilarial release by female worms remain largely unknown. A better understanding of the effects of ivermectin on O volvulus microfilariae and macrofilariae is crucial to improve our ability to predict the long-term effect of treatment. We did a systematic review of individual and population-based ivermectin trials to investigate the temporal dynamics of the drug's microfilaricidal and embryostatic efficacy after administration of a single, standard dose (150 microg/kg). Meta-analyses on data from 26 microfilarial and 15 macrofilarial studies were linked by a mathematical model describing the dynamics of potentially fertile female parasites to skin microfilariae. The model predicts that after treatment, microfilaridermia would be reduced by half after 24 h, by 85% after 72 h, by 94% after 1 week, and by 98-99% after 1-2 months, the latter also corresponding to the time when the fraction of females harbouring live microfilariae is at its lowest (reduced by around 70% from its original value). Our results provide a baseline microfilarial skin repopulation curve against which to compare studies done after long-term treatment.
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              Helminth infections of humans: mathematical models, population dynamics, and control.

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                Author and article information

                Contributors
                Role: ConceptualizationRole: Formal analysisRole: MethodologyRole: SoftwareRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: MethodologyRole: SoftwareRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: MethodologyRole: SoftwareRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Funding acquisitionRole: MethodologyRole: SupervisionRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                5 December 2019
                December 2019
                : 13
                : 12
                : e0007557
                Affiliations
                [1 ] London Centre for Neglected Tropical Disease Research (LCNTDR), Department of Infectious Disease Epidemiology, School of Public Health, Faculty of Medicine (St Mary’s campus), Imperial College London, London, United Kingdom
                [2 ] MRC Centre for Global Infectious Disease Analysis, Department of Infectious Disease Epidemiology, School of Public Health, Faculty of Medicine (St Mary’s campus), Imperial College London, London, United Kingdom
                [3 ] London Centre for Neglected Tropical Disease Research (LCNTDR), Department of Pathobiology and Population Sciences, Royal Veterinary College, University of London, Hatfield, Untied Kingdom
                University of Zurich, SWITZERLAND
                Author notes

                The authors have no competing interests.

                These authors are joint senior authors on this work.

                Author information
                http://orcid.org/0000-0001-5755-2867
                http://orcid.org/0000-0001-6465-8221
                Article
                PNTD-D-19-00103
                10.1371/journal.pntd.0007557
                7006940
                31805049
                285a2c9b-4de5-40f1-bef3-ca5350af0135
                © 2019 Hamley et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 27 January 2019
                : 18 June 2019
                Page count
                Figures: 5, Tables: 0, Pages: 21
                Funding
                JIDH, MW and MGB gratefully acknowledge funding from the NTD Modelling Consortium ( https://www.ntdmodelling.org, grant number OPP1053230) by the Bill and Melinda Gates Foundation ( https://www.gatesfoundation.org/) in partnership with the Task Force for Global Health ( https://www.taskforce.org). PM is supported by a UK Medical Research Council doctoral training award. MGB acknowledges joint Centre funding from the UK Medical Research Council and Department for International Development (grant number MR/R015600/1). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Medicine and Health Sciences
                Parasitic Diseases
                Helminth Infections
                Onchocerciasis
                Medicine and Health Sciences
                Tropical Diseases
                Neglected Tropical Diseases
                Onchocerciasis
                Medicine and Health Sciences
                Parasitic Diseases
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Helminths
                Onchocerca Volvulus
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Invertebrates
                Nematoda
                Onchocerca
                Onchocerca Volvulus
                Biology and Life Sciences
                Population Biology
                Population Metrics
                Population Density
                Biology and Life Sciences
                Developmental Biology
                Life Cycles
                Larvae
                People and Places
                Population Groupings
                Age Groups
                Adults
                Biology and Life Sciences
                Developmental Biology
                Life Cycles
                Parasitic Life Cycles
                Biology and Life Sciences
                Parasitology
                Parasitic Life Cycles
                Biology and Life Sciences
                Population Biology
                Population Dynamics
                Custom metadata
                vor-update-to-uncorrected-proof
                2020-02-07
                The model code is available at https://github.com/jonathanhamley. All data used for the analyses are contained in the figures.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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