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      Regulation of cell cycle drivers by Cullin-RING ubiquitin ligases

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          Abstract

          The last decade has revealed new roles for Cullin-RING ubiquitin ligases (CRLs) in a myriad of cellular processes, including cell cycle progression. In addition to CRL1, also named SCF (SKP1-Cullin 1-F box protein), which has been known for decades as an important factor in the regulation of the cell cycle, it is now evident that all eight CRL family members are involved in the intricate cellular pathways driving cell cycle progression. In this review, we summarize the structure of CRLs and their functions in driving the cell cycle. We focus on how CRLs target key proteins for degradation or otherwise alter their functions to control the progression over the various cell cycle phases leading to cell division. We also summarize how CRLs and the anaphase-promoting complex/cyclosome (APC/C) ligase complex closely cooperate to govern efficient cell cycle progression.

          Cell biology: Cell cycle mediators offer therapeutic targets

          A large group of protein complexes involved in regulating cell division offers an array of promising new drug targets for treating cancer and neurodegeneration. Mirit Aladjem, Sang-Min Jang and colleagues from the US National Cancer Institute in Bethesda, USA, review the structure and function of cullin-RING ubiquitin ligases (CRLs), a “super-family” of multi-subunit enzymes that serve as critical checkpoints on the cell cycle and DNA replication. CRLs promote progression through the cell cycle by targeting other key proteins for degradation or modification. They also work with other protein complexes to ensure genome integrity in the face of DNA damage. Because CRL components are often mutated or otherwise dysregulated in tumors and other diseased cells, small-molecule inhibitors and modulators of CRL activity could have therapeutic benefit for patients.

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          Most cited references124

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          p21 in cancer: intricate networks and multiple activities.

          One of the main engines that drives cellular transformation is the loss of proper control of the mammalian cell cycle. The cyclin-dependent kinase inhibitor p21 (also known as p21WAF1/Cip1) promotes cell cycle arrest in response to many stimuli. It is well positioned to function as both a sensor and an effector of multiple anti-proliferative signals. This Review focuses on recent advances in our understanding of the regulation of p21 and its biological functions with emphasis on its p53-independent tumour suppressor activities and paradoxical tumour-promoting activities, and their implications in cancer.
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            The myeloma drug lenalidomide promotes the cereblon-dependent destruction of Ikaros proteins.

            Thalidomide-like drugs such as lenalidomide are clinically important treatments for multiple myeloma and show promise for other B cell malignancies. The biochemical mechanisms underlying their antitumor activity are unknown. Thalidomide was recently shown to bind to, and inhibit, the cereblon ubiquitin ligase. Cereblon loss in zebrafish causes fin defects reminiscent of the limb defects seen in children exposed to thalidomide in utero. Here we show that lenalidomide-bound cereblon acquires the ability to target for proteasomal degradation two specific B cell transcription factors, Ikaros family zinc finger proteins 1 and 3 (IKZF1 and IKZF3). Analysis of myeloma cell lines revealed that loss of IKZF1 and IKZF3 is both necessary and sufficient for lenalidomide's therapeutic effect, suggesting that the antitumor and teratogenic activities of thalidomide-like drugs are dissociable.
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              Structure of the DDB1-CRBN E3 ubiquitin ligase in complex with thalidomide

              In the 1950s the drug thalidomide administered as a sedative to pregnant women led to the birth of thousands of children with multiple defects. Despite its teratogenicity, thalidomide and its derivatives lenalidomide and pomalidomide (together known as Immunomodulatory Drugs: IMiDs) recently emerged as effective treatments for multiple myeloma and 5q-dysplasia. IMiDs target the CUL4-RBX1-DDB1-CRBN (CRL4CRBN) E3 ubiquitin ligase and promote the ubiquitination of Ikaros/Aiolos transcription factors by CRL4CRBN. Here we present the crystal structure of the DDB1-CRBN complex bound to thalidomide, lenalidomide and pomalidomide. The structure establishes CRBN as a CRL4CRBN substrate receptor, which enantioselectively binds IMiDs. Through an unbiased screen we identify the homeobox transcription factor MEIS2 as an endogenous substrate of CRL4CRBN. Our studies suggest that IMiDs block endogenous substrates (MEIS2) from binding to CRL4CRBN when recruiting Ikaros/Aiolos for degradation. This dual activity implies that small molecules can principally modulate a ligase to up- or down-regulate the ubiquitination of proteins.
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                Author and article information

                Contributors
                smjang@cbnu.ac.kr
                aladjemm@mail.nih.gov
                Journal
                Exp Mol Med
                Exp Mol Med
                Experimental & Molecular Medicine
                Nature Publishing Group UK (London )
                1226-3613
                2092-6413
                2 October 2020
                2 October 2020
                October 2020
                : 52
                : 10
                : 1637-1651
                Affiliations
                GRID grid.417768.b, ISNI 0000 0004 0483 9129, Developmental Therapeutics Branch, Center for Cancer Research, , National Cancer Institute, NIH, ; Bethesda, MD 20892-4255 USA
                Article
                508
                10.1038/s12276-020-00508-4
                8080560
                33005013
                298d25e0-197f-44c7-ba32-5c35685aaaa0
                © The Author(s) 2020

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 30 June 2020
                : 10 August 2020
                Funding
                Funded by: intramural program of the Center for Cancer Research, National Cancer Institute, US National Institutes of Health (1ZIABC010411-20 to MIA)
                Categories
                Review Article
                Custom metadata
                © The Author(s) 2020

                Molecular medicine
                drug development,targeted therapies,origin firing,chromatin remodelling,post-translational modifications

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