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      Multiple evolutionary origins of Trypanosoma evansi in Kenya

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          Abstract

          Trypanosoma evansi is the parasite causing surra, a form of trypanosomiasis in camels and other livestock, and a serious economic burden in Kenya and many other parts of the world. Trypanosoma evansi transmission can be sustained mechanically by tabanid and Stomoxys biting flies, whereas the closely related African trypanosomes T. brucei brucei and T. b. rhodesiense require cyclical development in tsetse flies (genus Glossina) for transmission. In this study, we investigated the evolutionary origins of T. evansi. We used 15 polymorphic microsatellites to quantify levels and patterns of genetic diversity among 41 T. evansi isolates and 66 isolates of T. b. brucei (n = 51) and T. b. rhodesiense (n = 15), including many from Kenya, a region where T. evansi may have evolved from T. brucei. We found that T. evansi strains belong to at least two distinct T. brucei genetic units and contain genetic diversity that is similar to that in T. brucei strains. Results indicated that the 41 T. evansi isolates originated from multiple T. brucei strains from different genetic backgrounds, implying independent origins of T. evansi from T. brucei strains. This surprising finding further suggested that the acquisition of the ability of T. evansi to be transmitted mechanically, and thus the ability to escape the obligate link with the African tsetse fly vector, has occurred repeatedly. These findings, if confirmed, have epidemiological implications, as T. brucei strains from different genetic backgrounds can become either causative agents of a dangerous, cosmopolitan livestock disease or of a lethal human disease, like for T. b. rhodesiense.

          Author summary

          Trypanosoma evansi is an important pathogen of the camel and other livestock where it is a causative agent of surra (an economically burdensome disease). The T. evansi is found in Kenya and the rest of the world. This study indicates that T. evansi originated recently from multiple Trypanosoma brucei strains from different genetic backgrounds. This suggests multiple independent evolutionary origins of some complex traits that may have facilitated mechanical transmission in T. evansi and subsequently enabled the parasite to escape the obligate link with the African tsetse fly vector. This evolutionary origin appears to have occurred repeatedly. Our results provide a more comprehensive understanding of the epidemiology of surra, provide recommendations for future work, and indicate a need to consider the risk of horizontal transfer of epidemiologically relevant traits among different Trypanosoma genetic backgrounds in any control campaign. Thus, our study is an important contribution to the field, and represents an important step towards the ultimate aim of trypanosomiasis prevention and/or elimination.

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          Most cited references70

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          The genetical structure of populations.

          S. Wright (1951)
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            Human African trypanosomiasis.

            Human African trypanosomiasis (sleeping sickness) occurs in sub-Saharan Africa. It is caused by the protozoan parasite Trypanosoma brucei, transmitted by tsetse flies. Almost all cases are due to Trypanosoma brucei gambiense, which is indigenous to west and central Africa. Prevalence is strongly dependent on control measures, which are often neglected during periods of political instability, thus leading to resurgence. With fewer than 12 000 cases of this disabling and fatal disease reported per year, trypanosomiasis belongs to the most neglected tropical diseases. The clinical presentation is complex, and diagnosis and treatment difficult. The available drugs are old, complicated to administer, and can cause severe adverse reactions. New diagnostic methods and safe and effective drugs are urgently needed. Vector control, to reduce the number of flies in existing foci, needs to be organised on a pan-African basis. WHO has stated that if national control programmes, international organisations, research institutes, and philanthropic partners engage in concerted action, elimination of this disease might even be possible. Copyright 2010 Elsevier Ltd. All rights reserved.
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              Epidemiology of human African trypanosomiasis

              Human African trypanosomiasis (HAT), or sleeping sickness, is caused by Trypanosoma brucei gambiense, which is a chronic form of the disease present in western and central Africa, and by Trypanosoma brucei rhodesiense, which is an acute disease located in eastern and southern Africa. The rhodesiense form is a zoonosis, with the occasional infection of humans, but in the gambiense form, the human being is regarded as the main reservoir that plays a key role in the transmission cycle of the disease. The gambiense form currently assumes that 98% of the cases are declared; the Democratic Republic of the Congo is the most affected country, with more than 75% of the gambiense cases declared. The epidemiology of the disease is mediated by the interaction of the parasite (trypanosome) with the vectors (tsetse flies), as well as with the human and animal hosts within a particular environment. Related to these interactions, the disease is confined in spatially limited areas called “foci”, which are located in Sub-Saharan Africa, mainly in remote rural areas. The risk of contracting HAT is, therefore, determined by the possibility of contact of a human being with an infected tsetse fly. Epidemics of HAT were described at the beginning of the 20th century; intensive activities have been set up to confront the disease, and it was under control in the 1960s, with fewer than 5,000 cases reported in the whole continent. The disease resurged at the end of the 1990s, but renewed efforts from endemic countries, cooperation agencies, and nongovernmental organizations led by the World Health Organization succeeded to raise awareness and resources, while reinforcing national programs, reversing the trend of the cases reported, and bringing the disease under control again. In this context, sustainable elimination of the gambiense HAT, defined as the interruption of the transmission of the disease, was considered as a feasible target for 2030. Since rhodesiense HAT is a zoonosis, where the animal reservoir plays a key role, the interruption of the disease’s transmission is not deemed feasible.
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                Author and article information

                Contributors
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: MethodologyRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: MethodologyRole: SoftwareRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: MethodologyRole: Writing – review & editing
                Role: ConceptualizationRole: SupervisionRole: ValidationRole: Writing – review & editing
                Role: ResourcesRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: ResourcesRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: Funding acquisitionRole: ResourcesRole: SupervisionRole: Writing – review & editing
                Role: MethodologyRole: ResourcesRole: ValidationRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Funding acquisitionRole: InvestigationRole: Project administrationRole: ResourcesRole: SupervisionRole: ValidationRole: VisualizationRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS Negl Trop Dis
                PLoS Negl Trop Dis
                plos
                plosntds
                PLoS Neglected Tropical Diseases
                Public Library of Science (San Francisco, CA USA )
                1935-2727
                1935-2735
                7 September 2017
                September 2017
                : 11
                : 9
                : e0005895
                Affiliations
                [1 ] Biotechnology Research Institute, Kenya Agricultural and Livestock Research Organization, Kikuyu, Kenya
                [2 ] Department of Biomedical Sciences and Technology, School of Public Health and Community Development, Maseno University, Maseno, Kenya
                [3 ] Yale School of Public Health, Department of Epidemiology of Microbial Diseases, New Haven, CT, United States of America
                [4 ] Department of Ecology & Evolutionary Biology, Yale University, New Haven, CT, United States of America
                [5 ] Centre for Geographic Medicine Research Coast, Kenya Medical Research Institute, Kilifi, Kenya
                [6 ] Centre for Immunity, Infection & Evolution, and Institute of Immunology & Infection Research, University of Edinburgh, Edinburgh, Scotland, United Kingdom
                International Centre of Insect Physiology and Ecology, KENYA
                Author notes

                The authors have declared that no competing interests exist.

                Author information
                http://orcid.org/0000-0002-2221-040X
                Article
                PNTD-D-17-00503
                10.1371/journal.pntd.0005895
                5605091
                28880965
                2ef61f2d-2cdb-4c7f-b34d-8aff7d69a873
                © 2017 Kamidi et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 17 April 2017
                : 22 August 2017
                Page count
                Figures: 3, Tables: 2, Pages: 21
                Funding
                Funded by: NIH R01
                Award ID: AI068932
                Award Recipient :
                Funded by: Fogarty Global Infectious Diseases Training Grant
                Award ID: D43TW007391
                Award Recipient :
                Funded by: International Atomic Energy Agency
                Award ID: 16181/RO
                Award Recipient :
                Funded by: MRC Senior Research Fellowship
                Award ID: MR/L019701/1
                Award Recipient :
                Funded by: Parasitology training grant fellowship
                Award ID: (5T32AI007404-24)
                Award Recipient :
                This work received financial support from National Institute of Health Fogarty Center D43TW007391 and from IAEA contract number 16181/RO. AS was supported by MRC Senior Research Fellowship MR/L019701/1 to AS and NS by parasitology training grant fellowship to NPS (5T32AI007404-24). The research was accomplished while CMK was a Fogarty Research Fellow at Yale University. The funders had no role in study design data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology and Life Sciences
                Organisms
                Eukaryota
                Protozoans
                Parasitic Protozoans
                Trypanosoma
                Trypanosoma Brucei
                Trypanosoma Brucei Gambiense
                Biology and Life Sciences
                Organisms
                Eukaryota
                Protozoans
                Parasitic Protozoans
                Trypanosoma
                Biology and Life Sciences
                Organisms
                Eukaryota
                Animals
                Vertebrates
                Amniotes
                Mammals
                Camels
                Biology and Life Sciences
                Molecular Biology
                Molecular Biology Techniques
                Artificial Gene Amplification and Extension
                Polymerase Chain Reaction
                Research and Analysis Methods
                Molecular Biology Techniques
                Artificial Gene Amplification and Extension
                Polymerase Chain Reaction
                Biology and Life Sciences
                Cell Biology
                Cellular Structures and Organelles
                Kinetoplasts
                Biology and Life Sciences
                Evolutionary Biology
                Evolutionary Genetics
                Biology and Life Sciences
                Organisms
                Eukaryota
                Protozoans
                Parasitic Protozoans
                Trypanosoma
                Trypanosoma Brucei
                Biology and Life Sciences
                Parasitology
                Parasite Evolution
                Custom metadata
                vor-update-to-uncorrected-proof
                2017-09-19
                All data files are available from the dryad database doi: 10.5061/dryad.8g678.

                Infectious disease & Microbiology
                Infectious disease & Microbiology

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