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      A multi-mineral intervention to counter pro-inflammatory activity and to improve the barrier in human colon organoids

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          Abstract

          Introduction: Ulcerative colitis is a chronic inflammatory condition, and continuous inflammatory stimulus may lead to barrier dysfunction. The goal of this study was to assess barrier proteomic expression by a red algae-derived multi-mineral intervention in the absence or presence of pro-inflammatory insult.

          Methods: Human colon organoids were maintained in a control culture medium alone or exposed to lipopolysaccharide with a combination of three pro-inflammatory cytokines [tumor necrosis factor-α, interleukin-1β and interferon-γ (LPS-cytokines)] to mimic the environment in the inflamed colon. Untreated organoids and those exposed to LPS-cytokines were concomitantly treated for 14 days with a multi-mineral product (Aquamin ®) that has previously been shown to improve barrier structure/function. The colon organoids were subjected to proteomic analysis to obtain a broad view of the protein changes induced by the two interventions alone and in combination. In parallel, confocal fluorescence microscopy, tissue cohesion and transepithelial electrical resistance (TEER) measurements were used to assess barrier structure/function.

          Results: The LPS-cytokine mix altered the expression of multiple proteins that influence innate immunity and promote inflammation. Several of these were significantly decreased with Aquamin ® alone but only a modest decrease in a subset of these proteins was detected by Aquamin ® in the presence of LPS-cytokines. Among these, a subset of inflammation-related proteins including fibrinogen-β and -γ chains (FGB and FGG), phospholipase A2 (PLA2G2A) and SPARC was significantly downregulated in the presence of Aquamin ® (alone and in combination with LPS-cytokines); another subset of proteins with anti-inflammatory, antioxidant or anti-microbial activity was upregulated by Aquamin ® treatment. When provided alone, Aquamin ® strongly upregulated proteins that contribute to barrier formation and tissue strength. Concomitant treatment with LPS-cytokines did not inhibit barrier formation in response to Aquamin ®. Confocal microscopy also displayed increased expression of desmoglein-2 (DSG2) and cadherin-17 (CDH17) with Aquamin ®, either alone or in the presence of the pro-inflammatory stimulus. Increased cohesion and TEER with Aquamin ® (alone or in the presence of LPS-cytokines) indicates improved barrier function.

          Conclusion: Taken together, these findings suggest that multi-mineral intervention (Aquamin ®) may provide a novel approach to combating inflammation in the colon by improving barrier structure/function as well as by directly altering the expression of certain pro-inflammatory proteins.

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          Most cited references71

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          MultiNotch MS3 Enables Accurate, Sensitive, and Multiplexed Detection of Differential Expression across Cancer Cell Line Proteomes

          Multiplexed quantitation via isobaric chemical tags (e.g., tandem mass tags (TMT) and isobaric tags for relative and absolute quantitation (iTRAQ)) has the potential to revolutionize quantitative proteomics. However, until recently the utility of these tags was questionable due to reporter ion ratio distortion resulting from fragmentation of coisolated interfering species. These interfering signals can be negated through additional gas-phase manipulations (e.g., MS/MS/MS (MS3) and proton-transfer reactions (PTR)). These methods, however, have a significant sensitivity penalty. Using isolation waveforms with multiple frequency notches (i.e., synchronous precursor selection, SPS), we coisolated and cofragmented multiple MS2 fragment ions, thereby increasing the number of reporter ions in the MS3 spectrum 10-fold over the standard MS3 method (i.e., MultiNotch MS3). By increasing the reporter ion signals, this method improves the dynamic range of reporter ion quantitation, reduces reporter ion signal variance, and ultimately produces more high-quality quantitative measurements. To demonstrate utility, we analyzed biological triplicates of eight colon cancer cell lines using the MultiNotch MS3 method. Across all the replicates we quantified 8 378 proteins in union and 6 168 proteins in common. Taking into account that each of these quantified proteins contains eight distinct cell-line measurements, this data set encompasses 174 704 quantitative ratios each measured in triplicate across the biological replicates. Herein, we demonstrate that the MultiNotch MS3 method uniquely combines multiplexing capacity with quantitative sensitivity and accuracy, drastically increasing the informational value obtainable from proteomic experiments.
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            Tight junctions: from simple barriers to multifunctional molecular gates.

            Epithelia and endothelia separate different tissue compartments and protect multicellular organisms from the outside world. This requires the formation of tight junctions, selective gates that control paracellular diffusion of ions and solutes. Tight junctions also form the border between the apical and basolateral plasma-membrane domains and are linked to the machinery that controls apicobasal polarization. Additionally, signalling networks that guide diverse cell behaviours and functions are connected to tight junctions, transmitting information to and from the cytoskeleton, nucleus and different cell adhesion complexes. Recent advances have broadened our understanding of the molecular architecture and cellular functions of tight junctions.
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              The reactome pathway knowledgebase 2022

              The Reactome Knowledgebase ( https://reactome.org ), an Elixir core resource, provides manually curated molecular details across a broad range of physiological and pathological biological processes in humans, including both hereditary and acquired disease processes. The processes are annotated as an ordered network of molecular transformations in a single consistent data model. Reactome thus functions both as a digital archive of manually curated human biological processes and as a tool for discovering functional relationships in data such as gene expression profiles or somatic mutation catalogs from tumor cells. Recent curation work has expanded our annotations of normal and disease-associated signaling processes and of the drugs that target them, in particular infections caused by the SARS-CoV-1 and SARS-CoV-2 coronaviruses and the host response to infection. New tools support better simultaneous analysis of high-throughput data from multiple sources and the placement of understudied (‘dark’) proteins from analyzed datasets in the context of Reactome’s manually curated pathways.
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                Author and article information

                Contributors
                Journal
                Front Cell Dev Biol
                Front Cell Dev Biol
                Front. Cell Dev. Biol.
                Frontiers in Cell and Developmental Biology
                Frontiers Media S.A.
                2296-634X
                05 July 2023
                2023
                : 11
                : 1132905
                Affiliations
                Department of Pathology , The University of Michigan Medical School , Ann Arbor, MI, United States
                Author notes

                Edited by: Simona Ceccarelli, Sapienza University of Rome, Italy

                Reviewed by: Thaher Pelaseyed, University of Gothenburg, Sweden

                Addy Alt-Holland, Tufts University, United States

                *Correspondence: Muhammad N. Aslam, mnaslam@ 123456med.umich.edu
                Article
                1132905
                10.3389/fcell.2023.1132905
                10354648
                42b3e3fb-f324-40a4-a041-1251900ba5ac
                Copyright © 2023 Varani, McClintock, Nadeem, Harber, Zeidan and Aslam.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 28 December 2022
                : 21 June 2023
                Funding
                Funded by: National Institutes of Health , doi 10.13039/100000002;
                Award ID: CA201782
                Funded by: Office of Dietary Supplements , doi 10.13039/100000063;
                Award ID: Supplemental funding
                Funded by: American Society for Investigative Pathology , doi 10.13039/100011306;
                Award ID: Summer Research Opportunity Program in Pathology
                Funded by: University of Michigan , doi 10.13039/100007270;
                Award ID: Pandemic Research Recovery
                This work was supported by: CA201782—National Institutes of Health (NIH), https://www.nih.gov/ to JV, Supplemental funding through the Office of Dietary Supplements, https://ods.od.nih.gov/ to JV, University of Michigan Pandemic Research Recovery (PRR) funding to MA, and funding from the American Society for Investigative Pathology (ASIP) Summer Research Opportunity Program in Pathology (SROPP) to MA.
                Categories
                Cell and Developmental Biology
                Original Research
                Custom metadata
                Molecular and Cellular Pathology

                colon organoids,cytokines,gut barrier,inflammation,lps,multi-mineral,proteomics,ulcerative colitis

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