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      Development of prediction models for lymph node metastasis in endometrioid endometrial carcinoma

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          Abstract

          Background

          In endometrioid endometrial cancer (EEC), current clinical algorithms do not accurately predict patients with lymph node metastasis (LNM), leading to both under- and over-treatment. We aimed to develop models that integrate protein data with clinical information to identify patients requiring more aggressive surgery, including lymphadenectomy.

          Methods

          Protein expression profiles were generated for 399 patients using reverse-phase protein array. Three generalised linear models were built on proteins and clinical information (model 1), also with magnetic resonance imaging included (model 2), and on proteins only (model 3), using a training set, and tested in independent sets. Gene expression data from the tumours were used for confirmatory testing.

          Results

          LNM was predicted with area under the curve 0.72–0.89 and cyclin D1; fibronectin and grade were identified as important markers. High levels of fibronectin and cyclin D1 were associated with poor survival ( p = 0.018), and with markers of tumour aggressiveness. Upregulation of both FN1 and CCND1 messenger RNA was related to cancer invasion and mesenchymal phenotype.

          Conclusions

          We demonstrate that data-driven prediction models, adding protein markers to clinical information, have potential to significantly improve preoperative identification of patients with LNM in EEC.

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          Most cited references55

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          Global Cancer Statistics 2018: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries

          This article provides a status report on the global burden of cancer worldwide using the GLOBOCAN 2018 estimates of cancer incidence and mortality produced by the International Agency for Research on Cancer, with a focus on geographic variability across 20 world regions. There will be an estimated 18.1 million new cancer cases (17.0 million excluding nonmelanoma skin cancer) and 9.6 million cancer deaths (9.5 million excluding nonmelanoma skin cancer) in 2018. In both sexes combined, lung cancer is the most commonly diagnosed cancer (11.6% of the total cases) and the leading cause of cancer death (18.4% of the total cancer deaths), closely followed by female breast cancer (11.6%), prostate cancer (7.1%), and colorectal cancer (6.1%) for incidence and colorectal cancer (9.2%), stomach cancer (8.2%), and liver cancer (8.2%) for mortality. Lung cancer is the most frequent cancer and the leading cause of cancer death among males, followed by prostate and colorectal cancer (for incidence) and liver and stomach cancer (for mortality). Among females, breast cancer is the most commonly diagnosed cancer and the leading cause of cancer death, followed by colorectal and lung cancer (for incidence), and vice versa (for mortality); cervical cancer ranks fourth for both incidence and mortality. The most frequently diagnosed cancer and the leading cause of cancer death, however, substantially vary across countries and within each country depending on the degree of economic development and associated social and life style factors. It is noteworthy that high-quality cancer registry data, the basis for planning and implementing evidence-based cancer control programs, are not available in most low- and middle-income countries. The Global Initiative for Cancer Registry Development is an international partnership that supports better estimation, as well as the collection and use of local data, to prioritize and evaluate national cancer control efforts. CA: A Cancer Journal for Clinicians 2018;0:1-31. © 2018 American Cancer Society.
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            Comprehensive Molecular Characterization of Human Colon and Rectal Cancer

            Summary To characterize somatic alterations in colorectal carcinoma (CRC), we conducted genome-scale analysis of 276 samples, analyzing exome sequence, DNA copy number, promoter methylation, mRNA and microRNA expression. A subset (97) underwent low-depth-of-coverage whole-genome sequencing. 16% of CRC have hypermutation, three quarters of which have the expected high microsatellite instability (MSI), usually with hypermethylation and MLH1 silencing, but one quarter has somatic mismatch repair gene mutations. Excluding hypermutated cancers, colon and rectum cancers have remarkably similar patterns of genomic alteration. Twenty-four genes are significantly mutated. In addition to the expected APC, TP53, SMAD4, PIK3CA and KRAS mutations, we found frequent mutations in ARID1A, SOX9, and FAM123B/WTX. Recurrent copy number alterations include potentially drug-targetable amplifications of ERBB2 and newly discovered amplification of IGF2. Recurrent chromosomal translocations include fusion of NAV2 and WNT pathway member TCF7L1. Integrative analyses suggest new markers for aggressive CRC and important role for MYC-directed transcriptional activation and repression.
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              Integrated Genomic Characterization of Endometrial Carcinoma

              Summary We performed an integrated genomic, transcriptomic, and proteomic characterization of 373 endometrial carcinomas using array- and sequencing-based technologies. Uterine serous tumors and ~25% of high-grade endometrioid tumors have extensive copy number alterations, few DNA methylation changes, low ER/PR levels, and frequent TP53 mutations. Most endometrioid tumors have few copy number alterations or TP53 mutations but frequent mutations in PTEN, CTNNB1, PIK3CA, ARID1A, KRAS and novel mutations in the SWI/SNF gene ARID5B. A subset of endometrioid tumors we identified had a dramatically increased transversion mutation frequency, and newly identified hotspot mutations in POLE. Our results classified endometrial cancers into four categories: POLE ultramutated, microsatellite instability hypermutated, copy number low, and copy number high. Uterine serous carcinomas share genomic features with ovarian serous and basal-like breast carcinomas. We demonstrated that the genomic features of endometrial carcinomas permit a reclassification that may impact post-surgical adjuvant treatment for women with aggressive tumors.
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                Author and article information

                Contributors
                hege.berg@uib.no
                Journal
                Br J Cancer
                Br. J. Cancer
                British Journal of Cancer
                Nature Publishing Group UK (London )
                0007-0920
                1532-1827
                10 February 2020
                31 March 2020
                : 122
                : 7
                : 1014-1022
                Affiliations
                [1 ]ISNI 0000 0004 1936 7443, GRID grid.7914.b, Centre for Cancer Biomarkers; Department of Clinical Science, , University of Bergen, ; Bergen, Norway
                [2 ]ISNI 0000 0000 9753 1393, GRID grid.412008.f, Department of Obstetrics and Gynaecology, , Haukeland University Hospital, ; Bergen, Norway
                [3 ]ISNI 0000 0001 2291 4776, GRID grid.240145.6, Bioinformatics and Computational Biology, , UT M.D. Anderson Cancer Center, ; Houston, TX USA
                [4 ]ISNI 0000 0004 1936 7443, GRID grid.7914.b, Section for Radiology, Department of Clinical Medicine, , University of Bergen, ; Bergen, Norway
                [5 ]ISNI 0000 0000 9753 1393, GRID grid.412008.f, Department of Radiology, , Haukeland University Hospital, ; Bergen, Norway
                [6 ]ISNI 0000 0001 2291 4776, GRID grid.240145.6, Department of Gynaecologic Oncology and Reproductive Medicine, , UT M.D. Anderson Cancer Center, ; Houston, TX USA
                [7 ]ISNI 0000 0000 9758 5690, GRID grid.5288.7, Department of Cell, Development and Cancer Biology, Knight Cancer Institute, , Oregon Health and Science University, ; Portland, OR USA
                [8 ]ISNI 0000 0004 0480 1382, GRID grid.412966.e, Department of Obstetrics and Gynecology, School for Oncology and Developmental Biology, , Maastricht University Medical Centre, ; Maastricht, The Netherlands
                Article
                745
                10.1038/s41416-020-0745-6
                7109044
                32037399
                4ee63481-280a-40a7-8cb3-0d2e2c1b2d63
                © The Author(s), under exclusive licence to Cancer Research UK 2020

                Note This work is published under the standard license to publish agreement. After 12 months the work will become freely available and the license terms will switch to a Creative Commons Attribution 4.0 International (CC BY 4.0).

                History
                : 9 October 2019
                : 8 January 2020
                : 15 January 2020
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100005036, Universitetet i Bergen (University of Bergen);
                Funded by: FundRef https://doi.org/10.13039/100008730, Kreftforeningen (Norwegian Cancer Society);
                Categories
                Article
                Custom metadata
                © Cancer Research UK 2020

                Oncology & Radiotherapy
                metastasis,endometrial cancer
                Oncology & Radiotherapy
                metastasis, endometrial cancer

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