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      The Halophilic Bacterium Paracoccus haeundaensis for the Production of Poly(3-Hydroxybutyrate- co-3-Hydroxyvalerate) from Single Carbon Sources

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          Abstract

          The study objective was to evaluate the potential production of polyhydroxyalkanoates (PHAs), a biodegradable plastic material, by Paracoccus haeundaensis for which PHA production has never been reported. To identify the most effective nitrogen-limited culture conditions for PHAs production from this bacterium, batch fermentation using glucose concentrations ranging from 4 g l -1 to 20 g l -1 with a fixed ammonium concentration of 0.5 g l -1 was carried out at 30°C and pH 8.0. A glucose supplement of 12 g l -1 produced the highest PHA concentration (1.6 g l -1) and PHA content (0.63 g g -1) thereby identifying the optimal condition for PHA production from this bacterium. Gas chromatography-mass spectrometry analysis suggests that P. haeundaensis mostly produced copolymer types of poly(3-hydroxybutyrate- co-3-hydroxyvalerate) [P(3HB- co-3HV)] from glucose concentrations at 12 g l -1 or higher under the nitrogen-limited conditions. When several other single carbon sources were evaluated for the most efficient PHA production, fructose provided the highest biomass (2.8 g l -1), and PHAs (1.29 g l -1) concentrations. Results indicated that this bacterium mostly produced the copolymers P(3HB- co-3HV) from single carbon sources composing a range of 93–98% of 3-hydroxybutyrate and 2–7% of 3-hydroxyvalerate, whereas mannose-supplemented conditions produced the only homopolymer type of P(3HB). However, when propionic acid as a secondary carbon source were supplemented into the media, P. haeundaensis produced the copolymer P(3HB- co-3HV), composed of a 50% maximum monomeric unit of 3-hydroxyvaleric acid (3HV). However, as the concentration of propionic acid increased, cell biomass and PHAs concentrations substantially decreased due to cell toxicity.

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          Production, use, and fate of all plastics ever made

          We present the first ever global account of the production, use, and end-of-life fate of all plastics ever made by humankind.
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            KEGG as a reference resource for gene and protein annotation

            KEGG (http://www.kegg.jp/ or http://www.genome.jp/kegg/) is an integrated database resource for biological interpretation of genome sequences and other high-throughput data. Molecular functions of genes and proteins are associated with ortholog groups and stored in the KEGG Orthology (KO) database. The KEGG pathway maps, BRITE hierarchies and KEGG modules are developed as networks of KO nodes, representing high-level functions of the cell and the organism. Currently, more than 4000 complete genomes are annotated with KOs in the KEGG GENES database, which can be used as a reference data set for KO assignment and subsequent reconstruction of KEGG pathways and other molecular networks. As an annotation resource, the following improvements have been made. First, each KO record is re-examined and associated with protein sequence data used in experiments of functional characterization. Second, the GENES database now includes viruses, plasmids, and the addendum category for functionally characterized proteins that are not represented in complete genomes. Third, new automatic annotation servers, BlastKOALA and GhostKOALA, are made available utilizing the non-redundant pangenome data set generated from the GENES database. As a resource for translational bioinformatics, various data sets are created for antimicrobial resistance and drug interaction networks.
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              THE USE OF LEAD CITRATE AT HIGH pH AS AN ELECTRON-OPAQUE STAIN IN ELECTRON MICROSCOPY

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                Author and article information

                Journal
                J Microbiol Biotechnol
                J Microbiol Biotechnol
                Journal of Microbiology and Biotechnology
                The Korean Society for Microbiology and Biotechnology
                1017-7825
                1738-8872
                28 January 2024
                13 November 2023
                13 November 2023
                : 34
                : 1
                : 74-84
                Affiliations
                [1 ]Department of Microbiology, College of Natural Sciences, Pukyong National University, Busan 48513, Republic of Korea
                [2 ]School of Marine and Fisheries Life Science, Pukyong National University, Busan 48513, Republic of Korea
                [3 ]Bioresources Collection and Research Team, Nakdonggang National Institute of Biological Resources, Sangju 37242, Republic of Korea
                [4 ]Department of Biotechnology, Pukyong National University, Busan 48513, Republic of Korea
                [5 ]Department of Smart Bio-Health, Dong-eui University, Busan 47340, Republic of Korea
                [6 ]Biomedical Engineering and Biotechnology Major, Division of Applied Bioengineering, College of Engineering, Dong-eui University, Busan 47340, Republic of Korea
                [7 ]School of Biotechnology & Biomolecular Science, The University of New South Wales, Sydney, NSW 2052, Australia
                Author notes
                [* ] Corresponding author Phone: +82-51-629-5612 Fax: +82-51-629-5619 E-mail: youngjaejeon@ 123456pknu.ac.kr
                [†]

                These authors are equally contributed to this work.

                Article
                jmb-34-1-74
                10.4014/jmb.2305.05025
                10840474
                37997264
                6d571926-5f13-4f2e-abeb-d63931bd795f
                Copyright © 2024 by the authors. Licensee KMB

                This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license

                History
                : 23 May 2023
                : 29 October 2023
                : 31 October 2023
                Categories
                Research article
                Environmental Microbiology and Biotechnology (EMB)
                Microbial Genetics, Physiology, and Metabolism

                paracoccus haeundaensis,nitrogen-limited conditions,polyhydroxyalkanoates,poly(3-hydroxybutyrate),poly(3-hydroxybutyrate-co-3-hydroxyvalerate),batch fermentation

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