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      SARS-Cov-2RNA Found on Particulate Matter of Bergamo in Northern Italy: First Evidence

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          Abstract

          Background

          The burden of COVID-19 was extremely severe in Northern Italy, an area characterized by high concentrations of particulate matter (PM), which is known to negatively affect human health. Consistently with evidence already available for other viruses, we initially hypothesized the possibility of SARS-CoV-2 presence on PM, and we performed a first experiment specifically aimed at confirming or excluding this research hyphotesys.

          Methods

          We have colelcted 34 PM10 samples in Bergamo area (the epicenter of the Italian COVID-19 epidemic) by using two air samplers over a continuous 3-weeks period. Filters were properly stored and underwent RNA extraction and amplification according to WHO protocols in two parallel blind analyses performed by two different authorized laboratories. Up to three highly specific molecular marker genes (E, N, and RdRP) were used to test the presence of SARS-CoV-2 RNA on particulate matter.

          Results

          The first test showed positive results for gene E in 15 out of 16 samples, simultaneously displaying positivity also for RdRP gene in 4 samples. The second blind test got 5 additional positive results for at least one ofthe three marker genes. Overall, we tested 34 RNA extractions for the E, N and RdRP genes, reporting 20 positive results for at least one of the three marker genes, with positivity separately confirmed for all the three markers. Control tests to exclude false positivities were successfully accomplished.

          Conclusion

          This is the first evidence that SARS-CoV-2 RNA can be present on PM, thus suggesting a possible use as indicator of epidemic recurrence.

          Highlights

          • COVID-19 burden seems more severe in areas with high concentrations of PM.

          • Particulate matter is already known to have negative effects on human health.

          • This is the first evidence that SARS-CoV-2RNA can be found on particulate matter.

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          Most cited references11

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          Is Open Access

          Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR

          Background The ongoing outbreak of the recently emerged novel coronavirus (2019-nCoV) poses a challenge for public health laboratories as virus isolates are unavailable while there is growing evidence that the outbreak is more widespread than initially thought, and international spread through travellers does already occur. Aim We aimed to develop and deploy robust diagnostic methodology for use in public health laboratory settings without having virus material available. Methods Here we present a validated diagnostic workflow for 2019-nCoV, its design relying on close genetic relatedness of 2019-nCoV with SARS coronavirus, making use of synthetic nucleic acid technology. Results The workflow reliably detects 2019-nCoV, and further discriminates 2019-nCoV from SARS-CoV. Through coordination between academic and public laboratories, we confirmed assay exclusivity based on 297 original clinical specimens containing a full spectrum of human respiratory viruses. Control material is made available through European Virus Archive – Global (EVAg), a European Union infrastructure project. Conclusion The present study demonstrates the enormous response capacity achieved through coordination of academic and public laboratories in national and European research networks.
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            Deposition rates of viruses and bacteria above the atmospheric boundary layer

            Aerosolization of soil-dust and organic aggregates in sea spray facilitates the long-range transport of bacteria, and likely viruses across the free atmosphere. Although long-distance transport occurs, there are many uncertainties associated with their deposition rates. Here, we demonstrate that even in pristine environments, above the atmospheric boundary layer, the downward flux of viruses ranged from 0.26 × 10 9 to >7 × 10 9  m −2 per day. These deposition rates were 9–461 times greater than the rates for bacteria, which ranged from 0.3 × 10 7 to >8 × 10 7  m −2 per day. The highest relative deposition rates for viruses were associated with atmospheric transport from marine rather than terrestrial sources. Deposition rates of bacteria were significantly higher during rain events and Saharan dust intrusions, whereas, rainfall did not significantly influence virus deposition. Virus deposition rates were positively correlated with organic aerosols <0.7 μm, whereas, bacteria were primarily associated with organic aerosols >0.7 μm, implying that viruses could have longer residence times in the atmosphere and, consequently, will be dispersed further. These results provide an explanation for enigmatic observations that viruses with very high genetic identity can be found in very distant and different environments.
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              Collection, particle sizing and detection of airborne viruses

              Abstract Viruses that affect humans, animals and plants are often dispersed and transmitted through airborne routes of infection. Due to current technological deficiencies, accurate determination of the presence of airborne viruses is challenging. This shortcoming limits our ability to evaluate the actual threat arising from inhalation or other relevant contact with aerosolized viruses. To improve our understanding of the mechanisms of airborne transmission of viruses, air sampling technologies that can detect the presence of aerosolized viruses, effectively collect them and maintain their viability, and determine their distribution in aerosol particles, are needed. The latest developments in sampling and detection methodologies for airborne viruses, their limitations, factors that can affect their performance and current research needs, are discussed in this review. Much more work is needed on the establishment of standard air sampling methods and their performance requirements. Sampling devices that can collect a wide size range of virus‐containing aerosols and maintain the viability of the collected viruses are needed. Ideally, the devices would be portable and technology‐enabled for on‐the‐spot detection and rapid identification of the viruses. Broad understanding of the airborne transmission of viruses is of seminal importance for the establishment of better infection control strategies.
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                Author and article information

                Contributors
                Journal
                Environ Res
                Environ. Res
                Environmental Research
                Elsevier Inc.
                0013-9351
                1096-0953
                30 May 2020
                30 May 2020
                : 109754
                Affiliations
                [1 ]Dept. Industrial Chemistry, University of Bologna, Viale Del Risorgimento – 4, I-40136, Bologna, Italy
                [2 ]Interdepartmental Centre for Industrial Research "Renewable Sources, Environment, Blue Growth, Energy", University of Bologna, Rimini, Italy
                [3 ]Dept. of Biology, University “Aldo Moro” of Bari, Bari, Italy
                [4 ]Dept. of Chemical and Pharmaceutical Sciences, University of Trieste, Trieste, Italy
                [5 ]Environmental Research Division, TCR TECORA, Milan, Italy
                [6 ]Dept. of Life Sciences - University of Trieste, Trieste, Italy
                [7 ]Division of Laboratory Medicine, University Hospital Giuliano Isontina (ASU GI), Trieste, Italy
                [8 ]Italian Society of Environmental Medicine (SIMA), Milan, Italy
                [9 ]Department of Environmental Science and Policy, University of Milan, Milan, Italy
                Author notes
                []Corresponding author. Department of Industrial Chemistry, University of Bologna Viale del Risorgimento 4, 40136, Bologna, Italy; . leonardo.setti@ 123456unibo.it
                Article
                S0013-9351(20)30647-2 109754
                10.1016/j.envres.2020.109754
                7260575
                32526492
                6e1647e1-51e0-4782-a5e5-af98a5398cf0
                © 2020 Elsevier Inc. All rights reserved.

                Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.

                History
                : 17 May 2020
                : 26 May 2020
                : 26 May 2020
                Categories
                Article

                General environmental science
                covid-19,sars-cov-2,particulate matter,air pollution
                General environmental science
                covid-19, sars-cov-2, particulate matter, air pollution

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