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      Bayesian Space-Time Patterns and Climatic Determinants of Bovine Anaplasmosis

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          Abstract

          The space-time pattern and environmental drivers (land cover, climate) of bovine anaplasmosis in the Midwestern state of Kansas was retrospectively evaluated using Bayesian hierarchical spatio-temporal models and publicly available, remotely-sensed environmental covariate information. Cases of bovine anaplasmosis positively diagnosed at Kansas State Veterinary Diagnostic Laboratory ( n = 478) between years 2005–2013 were used to construct the models, which included random effects for space, time and space-time interaction effects with defined priors, and fixed-effect covariates selected a priori using an univariate screening procedure. The Bayesian posterior median and 95% credible intervals for the space-time interaction term in the best-fitting covariate model indicated a steady progression of bovine anaplasmosis over time and geographic area in the state. Posterior median estimates and 95% credible intervals derived for covariates in the final covariate model indicated land surface temperature (minimum), relative humidity and diurnal temperature range to be important risk factors for bovine anaplasmosis in the study. The model performance measured using the Area Under the Curve (AUC) value indicated a good performance for the covariate model (> 0.7). The relevance of climatological factors for bovine anaplasmosis is discussed.

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          Most cited references14

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          First Detection of Heartland Virus (Bunyaviridae: Phlebovirus) from Field Collected Arthropods

          Heartland virus (HRTV), the first pathogenic Phlebovirus (Family: Bunyaviridae) discovered in the United States, was recently described from two Missouri farmers. In 2012, we collected 56,428 ticks representing three species at 12 sites including both patients' farms. Amblyomma americanum and Dermacentor variabilis accounted for nearly all ticks collected. Ten pools composed of deplete nymphs of A. americanum collected at a patient farm and a nearby conservation area were reverse transcription-polymerase chain reaction positive, and eight pools yielded viable viruses. Sequence data from the nonstructural protein of the Small segment indicates that tick strains and human strains are very similar, ≥ 97.6% sequence identity. This is the first study to isolate HRTV from field-collected arthropods and to implicate ticks as potential vectors. Amblyomma americanum likely becomes infected by feeding on viremic hosts during the larval stage, and transmission to humans occurs during the spring and early summer when nymphs are abundant and actively host seeking.
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            Modelling risk from a disease in time and space.

            This paper combines existing models for longitudinal and spatial data in a hierarchical Bayesian framework, with particular emphasis on the role of time- and space-varying covariate effects. Data analysis is implemented via Markov chain Monte Carlo methods. The methodology is illustrated by a tentative re-analysis of Ohio lung cancer data 1968-1988. Two approaches that adjust for unmeasured spatial covariates, particularly tobacco consumption, are described. The first includes random effects in the model to account for unobserved heterogeneity; the second adds a simple urbanization measure as a surrogate for smoking behaviour. The Ohio data set has been of particular interest because of the suggestion that a nuclear facility in the southwest of the state may have caused increased levels of lung cancer there. However, we contend here that the data are inadequate for a proper investigation of this issue.
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              Modeling the Present and Future Geographic Distribution of the Lone Star Tick, Amblyomma americanum (Ixodida: Ixodidae), in the Continental United States

              The Lone star tick (Amblyomma americanum L.) is the primary vector for pathogens of significant public health importance in North America, yet relatively little is known about its current and potential future distribution. Building on a published summary of tick collection records, we used an ensemble modeling approach to predict the present-day and future distribution of climatically suitable habitat for establishment of the Lone star tick within the continental United States. Of the nine climatic predictor variables included in our five present-day models, average vapor pressure in July was by far the most important determinant of suitable habitat. The present-day ensemble model predicted an essentially contiguous distribution of suitable habitat extending to the Atlantic coast east of the 100th western meridian and south of the 40th northern parallel, but excluding a high elevation region associated with the Appalachian Mountains. Future ensemble predictions for 2061-2080 forecasted a stable western range limit, northward expansion of suitable habitat into the Upper Midwest and western Pennsylvania, and range contraction along portions of the Gulf coast and the lower Mississippi river valley. These findings are informative for raising awareness of A. americanum-transmitted pathogens in areas where the Lone Star tick has recently or may become established.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                22 March 2016
                2016
                : 11
                : 3
                : e0151924
                Affiliations
                [1 ]Kansas State Veterinary Diagnostic Laboratory and Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, United States of America
                [2 ]Center of Excellence for Vector-Borne Diseases, Department of Diagnostic Medicine/Pathobiology, College of Veterinary Medicine, Kansas State University, Manhattan, Kansas, United States of America
                University of Minnesota, UNITED STATES
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Conceived and designed the experiments: GAH RKR. Performed the experiments: GAH RKR. Analyzed the data: RKR. Contributed reagents/materials/analysis tools: GAA RRG. Wrote the paper: GAH RKR GAA RRG.

                Article
                PONE-D-15-47852
                10.1371/journal.pone.0151924
                4803217
                27003596
                715d9a48-b208-45d0-a8fc-bebeb49d18ee
                © 2016 Hanzlicek et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 1 November 2015
                : 7 March 2016
                Page count
                Figures: 4, Tables: 5, Pages: 13
                Funding
                The authors have no support or funding to report.
                Categories
                Research Article
                Medicine and Health Sciences
                Parasitic Diseases
                People and places
                Geographical locations
                North America
                United States
                Kansas
                Earth Sciences
                Atmospheric Science
                Meteorology
                Humidity
                Physical Sciences
                Materials Science
                Material Properties
                Surface Properties
                Surface Temperature
                Biology and Life Sciences
                Organisms
                Animals
                Vertebrates
                Amniotes
                Mammals
                Bovines
                Cattle
                Biology and Life Sciences
                Agriculture
                Livestock
                Cattle
                Biology and Life Sciences
                Organisms
                Animals
                Vertebrates
                Amniotes
                Mammals
                Ruminants
                Cattle
                Biology and Life Sciences
                Veterinary Science
                Veterinary Medicine
                Veterinary Diagnostics
                Earth Sciences
                Atmospheric Science
                Climatology
                Medicine and Health Sciences
                Epidemiology
                Disease Vectors
                Ticks
                Biology and Life Sciences
                Organisms
                Animals
                Invertebrates
                Arthropoda
                Arachnida
                Ixodes
                Ticks
                Custom metadata
                This study used retrospective epidemiological data collected at Kansas State Veterinary Diagnostic Laboratory. Explicit permission was not obtained from animal owners to make this data publicly available per Kansas State University's Office of Research Compliance. Data may be available from Kansas State University's Office of Research Compliance for researchers who meet the criteria for access to confidential data. Interested researchers may contact Heath Ritter ( hlr@ 123456k-state.edu ) or the corresponding author with data requests.

                Uncategorized
                Uncategorized

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