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      Exact integer linear programming solvers outperform simulated annealing for solving conservation planning problems

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          Abstract

          The resources available for conserving biodiversity are limited, and so protected areas need to be established in places that will achieve objectives for minimal cost. Two of the main algorithms for solving systematic conservation planning problems are Simulated Annealing (SA) and exact integer linear programing (EILP) solvers. Using a case study in BC, Canada, we compare the cost-effectiveness and processing times of SA used in Marxan versus EILP using both commercial and open-source algorithms. Plans for expanding protected area systems based on EILP algorithms were 12–30% cheaper than plans using SA, due to EILP’s ability to find optimal solutions as opposed to approximations. The best EILP solver we examined was on average 1,071 times faster than the SA algorithm tested. The performance advantages of EILP solvers were also observed when we aimed for spatially compact solutions by including a boundary penalty. One practical advantage of using EILP over SA is that the analysis does not require calibration, saving even more time. Given the performance of EILP solvers, they can be used to generate conservation plans in real-time during stakeholder meetings and can facilitate rapid sensitivity analysis, and contribute to a more transparent, inclusive, and defensible decision-making process.

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          ESTIMATING SITE OCCUPANCY RATES WHEN DETECTION PROBABILITIES ARE LESS THAN ONE

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                Author and article information

                Contributors
                Journal
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ Inc. (San Diego, USA )
                2167-8359
                27 May 2020
                2020
                : 8
                : e9258
                Affiliations
                [1 ]Department of Biology, Carleton University , Ottawa, ON, Canada
                [2 ]Ecosystem Science and Management Program, University of Northern British Columbia , Prince George, BC, Canada
                [3 ]School of Biological Sciences, University of Queensland , Brisbane, QLD, Australia
                [4 ]Cornell Lab of Ornithology, Cornell University , Ithaca, NY, USA
                Author information
                http://orcid.org/0000-0003-3191-7869
                http://orcid.org/0000-0002-4716-6134
                http://orcid.org/0000-0001-8929-7776
                Article
                9258
                10.7717/peerj.9258
                7261139
                75473e42-8500-46af-987d-35101eebb8db
                © 2020 Schuster et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

                History
                : 16 January 2020
                : 8 May 2020
                Funding
                Funded by: Liber Ero Fellowship and Environment and Climate Change Canada (ECCC)
                Funded by: Cornell Lab of Ornithology
                Funded by: Natural Sciences and Engineering Research Council of Canada and ECCC
                Richard Schuster is supported by a Liber Ero Fellowship and Environment and Climate Change Canada (ECCC), Jeffrey O Hanson by ECCC, Matthew Strimas-Mackey by endowments at the Cornell Lab of Ornithology, and Joseph R. Bennett by Natural Sciences and Engineering Research Council of Canada and ECCC. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Biodiversity
                Biogeography
                Conservation Biology
                Ecology
                Spatial and Geographic Information Science

                conservation planning,optimization,prioritization,integer linear programming,prioritizr,marxan

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