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      Infant brain imaging using magnetoencephalography: Challenges, solutions, and best practices

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          Abstract

          The excellent temporal resolution and advanced spatial resolution of magnetoencephalography (MEG) makes it an excellent tool to study the neural dynamics underlying cognitive processes in the developing brain. Nonetheless, a number of challenges exist when using MEG to image infant populations. There is a persistent belief that collecting MEG data with infants presents a number of limitations and challenges that are difficult to overcome. Due to this notion, many researchers either avoid conducting infant MEG research or believe that, in order to collect high‐quality data, they must impose limiting restrictions on the infant or the experimental paradigm. In this article, we discuss the various challenges unique to imaging awake infants and young children with MEG, and share general best‐practice guidelines and recommendations for data collection, acquisition, preprocessing, and analysis. The current article is focused on methodology that allows investigators to test the sensory, perceptual, and cognitive capacities of awake and moving infants. We believe that such methodology opens the pathway for using MEG to provide mechanistic explanations for the complex behavior observed in awake, sentient, and dynamically interacting infants, thus addressing core topics in developmental cognitive neuroscience.

          Abstract

          Magnetoencephalography (MEG) is an excellent tool to study the neural dynamics underlying cognitive processes in the developing brain. Nonetheless, a number of challenges exist when using MEG to image pediatric populations. In this article, we discuss the various challenges unique to imaging awake infants and young children with MEG, and share general best‐practice guidelines and recommendations for data collection, acquisition, preprocessing, and analysis.

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          Most cited references44

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          MEG and EEG data analysis with MNE-Python

          Magnetoencephalography and electroencephalography (M/EEG) measure the weak electromagnetic signals generated by neuronal activity in the brain. Using these signals to characterize and locate neural activation in the brain is a challenge that requires expertise in physics, signal processing, statistics, and numerical methods. As part of the MNE software suite, MNE-Python is an open-source software package that addresses this challenge by providing state-of-the-art algorithms implemented in Python that cover multiple methods of data preprocessing, source localization, statistical analysis, and estimation of functional connectivity between distributed brain regions. All algorithms and utility functions are implemented in a consistent manner with well-documented interfaces, enabling users to create M/EEG data analysis pipelines by writing Python scripts. Moreover, MNE-Python is tightly integrated with the core Python libraries for scientific comptutation (NumPy, SciPy) and visualization (matplotlib and Mayavi), as well as the greater neuroimaging ecosystem in Python via the Nibabel package. The code is provided under the new BSD license allowing code reuse, even in commercial products. Although MNE-Python has only been under heavy development for a couple of years, it has rapidly evolved with expanded analysis capabilities and pedagogical tutorials because multiple labs have collaborated during code development to help share best practices. MNE-Python also gives easy access to preprocessed datasets, helping users to get started quickly and facilitating reproducibility of methods by other researchers. Full documentation, including dozens of examples, is available at http://martinos.org/mne.
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            Spatiotemporal signal space separation method for rejecting nearby interference in MEG measurements.

            Limitations of traditional magnetoencephalography (MEG) exclude some important patient groups from MEG examinations, such as epilepsy patients with a vagus nerve stimulator, patients with magnetic particles on the head or having magnetic dental materials that cause severe movement-related artefact signals. Conventional interference rejection methods are not able to remove the artefacts originating this close to the MEG sensor array. For example, the reference array method is unable to suppress interference generated by sources closer to the sensors than the reference array, about 20-40 cm. The spatiotemporal signal space separation method proposed in this paper recognizes and removes both external interference and the artefacts produced by these nearby sources, even on the scalp. First, the basic separation into brain-related and external interference signals is accomplished with signal space separation based on sensor geometry and Maxwell's equations only. After this, the artefacts from nearby sources are extracted by a simple statistical analysis in the time domain, and projected out. Practical examples with artificial current dipoles and interference sources as well as data from real patients demonstrate that the method removes the artefacts without altering the field patterns of the brain signals.
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              Magnetoencephalography—theory, instrumentation, and applications to noninvasive studies of the working human brain

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                Author and article information

                Contributors
                mdclarke@uw.edu
                Journal
                Hum Brain Mapp
                Hum Brain Mapp
                10.1002/(ISSN)1097-0193
                HBM
                Human Brain Mapping
                John Wiley & Sons, Inc. (Hoboken, USA )
                1065-9471
                1097-0193
                16 April 2022
                15 August 2022
                : 43
                : 12 ( doiID: 10.1002/hbm.v43.12 )
                : 3609-3619
                Affiliations
                [ 1 ] Institute for Learning & Brain Sciences University of Washington Seattle Washington USA
                [ 2 ] Department of Psychology University of Washington Seattle Washington USA
                [ 3 ] Department of Speech and Hearing Sciences University of Washington Seattle Washington USA
                [ 4 ] Department of Physics University of Washington Seattle Washington USA
                Author notes
                [*] [* ] Correspondence

                Maggie D. Clarke, Institute for Learning & Brain Sciences, University of Washington, Seattle, WA 98195‐7988.

                Email: mdclarke@ 123456uw.edu

                Author information
                https://orcid.org/0000-0001-6198-0864
                https://orcid.org/0000-0003-4782-5360
                https://orcid.org/0000-0001-8683-0547
                Article
                HBM25871
                10.1002/hbm.25871
                9294291
                35429095
                7d5ee9b9-5e52-4a81-941f-4a3524109212
                © 2022 The Authors. Human Brain Mapping published by Wiley Periodicals LLC.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 24 February 2022
                : 10 November 2021
                : 17 March 2022
                Page count
                Figures: 5, Tables: 0, Pages: 11, Words: 8603
                Funding
                Funded by: National Institutes of Health , doi 10.13039/100000002;
                Award ID: R01‐NS104585
                Funded by: Infants to Adolescents Project, Bezos Family Foundation
                Funded by: Overdeck Family Foundation , doi 10.13039/100011742;
                Categories
                Technical Report
                Technical Report
                Custom metadata
                2.0
                August 15, 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.1.7 mode:remove_FC converted:19.07.2022

                Neurology
                analysis,guidelines,infant,magnetoencephalography,meg,processing,recommendations
                Neurology
                analysis, guidelines, infant, magnetoencephalography, meg, processing, recommendations

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