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      Introgression of Blast Resistance Genes (Putative Pi-b and Pi-kh) into Elite Rice Cultivar MR219 through Marker-Assisted Selection

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          Abstract

          Blast is the most common biotic stress leading to the reduction of rice yield in many rice-growing areas of the world, including Malaysia. Improvement of blast resistance of rice varieties cultivated in blast endemic areas is one of the most important objectives of rice breeding programs. In this study, the marker-assisted backcrossing strategy was applied to improve the blast resistance of the most popular Malaysian rice variety MR219 by introgressing blast resistance genes from the Pongsu Seribu 2 variety. Two blast resistance genes, Pi-b and Pi-kh, were pyramided into MR219. Foreground selection coupled with stringent phenotypic selection identified 15 plants homozygous for the Pi-b and Pi-kh genes, and background selection revealed more than 95% genome recovery of MR219 in advanced blast resistant lines. Phenotypic screening against blast disease indicated that advanced homozygous blast resistant lines were strongly resistant against pathotype P7.2 in the blast disease endemic areas. The morphological, yield, grain quality, and yield-contributing characteristics were significantly similar to those of MR219. The newly developed blast resistant improved lines will retain the high adoptability of MR219 by farmers. The present results will also play an important role in sustaining the rice production of Malaysia.

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          Most cited references59

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          Marker-assisted selection: an approach for precision plant breeding in the twenty-first century.

          DNA markers have enormous potential to improve the efficiency and precision of conventional plant breeding via marker-assisted selection (MAS). The large number of quantitative trait loci (QTLs) mapping studies for diverse crops species have provided an abundance of DNA marker-trait associations. In this review, we present an overview of the advantages of MAS and its most widely used applications in plant breeding, providing examples from cereal crops. We also consider reasons why MAS has had only a small impact on plant breeding so far and suggest ways in which the potential of MAS can be realized. Finally, we discuss reasons why the greater adoption of MAS in the future is inevitable, although the extent of its use will depend on available resources, especially for orphan crops, and may be delayed in less-developed countries. Achieving a substantial impact on crop improvement by MAS represents the great challenge for agricultural scientists in the next few decades.
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            Isolation of plant DNA from faesh tissue

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              The Pib gene for rice blast resistance belongs to the nucleotide binding and leucine-rich repeat class of plant disease resistance genes.

              Rice blast, caused by the fungal pathogen Magnaporthe grisea, is one of the most serious diseases of rice. Here we describe the isolation and characterization of Pib, one of the rice blast resistance genes. The Pib gene was isolated by a map-based cloning strategy. The deduced amino acid sequence of the Pib gene product contains a nucleotide binding site (NBS) and leucine-rich repeats (LRRs); thus, Pib is a member of the NBS-LRR class of plant disease resistance genes. Interestingly, a duplication of the kinase 1a, 2 and 3a motifs of the NBS region was found in the N-terminal half of the Pib protein. In addition, eight cysteine residues are clustered in the middle of the LRRs, a feature which has not been reported for other R genes. Pib gene expression was induced upon altered environmental conditions, such as altered temperatures and darkness.
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                Author and article information

                Contributors
                Journal
                Front Plant Sci
                Front Plant Sci
                Front. Plant Sci.
                Frontiers in Plant Science
                Frontiers Media S.A.
                1664-462X
                17 December 2015
                2015
                : 6
                : 1002
                Affiliations
                [1] 1Department of Crop Science, Faculty of Agriculture, Universiti Putra Malaysia Selangor, Malaysia
                [2] 2Department of Plant Breeding and Genetics, Faculty of Crop Production, Sindh Agriculture University Tandojam Sindh, Pakistan
                [3] 3Laboratory of Food Crops, Institute of Tropical Agriculture, Universiti Putra Malaysia Selangor, Malaysia
                [4] 4Department of Plant Protections, Faculty of Agriculture, Universiti Putra Malaysia Selangor, Malaysia
                [5] 5Agrotechnology and Bioscience Division, Malaysian Nuclear Agency Selangor, Malaysia
                [6] 6Department of Agronomy and Plant Breeding, Islamic Azad University of Yadegar-e-Imam Khomeini (RAH) Branch Tehran, Iran
                [7] 7Bangladesh Rice Research Institute Gazipur, Bangladesh
                Author notes

                Edited by: Janila Pasupuleti, International Crops Research Institute for the Semi-Arid Tropics, India

                Reviewed by: Manish Kumar Pandey, International Crops Research Institute for the Semi-Arid Tropics, India; Are Ashok Kumar, International Crops Research Institute for the Semi-Arid Tropics, India

                *Correspondence: Mohd Y. Rafii, mrafii@ 123456upm.edu.my

                This article was submitted to Plant Genetics and Genomics, a section of the journal Frontiers in Plant Science

                Article
                10.3389/fpls.2015.01002
                4682138
                7eabcdc5-de79-480a-b666-c1d6b4a3a6ff
                Copyright © 2015 Tanweer, Rafii, Sijam, Rahim, Ahmed, Ashkani and Latif.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 18 May 2015
                : 30 October 2015
                Page count
                Figures: 5, Tables: 8, Equations: 0, References: 61, Pages: 11, Words: 0
                Categories
                Plant Science
                Original Research

                Plant science & Botany
                rice,blast resistance,gene pyramiding,mabc,marker-assisted backcrossing,biotic stress

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