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      A new species of the odorous frog genus Odorrana (Amphibia, Anura, Ranidae) from southwestern China

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          Abstract

          The genus Odorrana is widely distributed in the mountains of East and Southeastern Asia. An increasing number of new species in the genus have been recognized especially in the last decade. Phylogenetic studies of the O. schmackeri species complex with wide distributional range also revealed several cryptic species. Here, we describe a new species in the species complex from Guizhou Province of China. Phylogenetic analyses based on mitochondrial DNA indicated the new species as a monophyly clustered into the Odorrana clade and sister to O. schmackeri, and nuclear DNA also indicated it as an independent lineage separated from its related species. Morphologically, the new species can be distinguished from its congeners based on a combination of the following characters: (1) having smaller body size in males (snout-vent length (SVL) <43.3 mm); (2) head longer than wide; (3) dorsolateral folds absent; (4) tympanum of males large and distinct, tympanum diameter twice as long as width of distal phalanx of finger III; (5) two metacarpal tubercles; (6) relative finger lengths: II < I < IV < III; (7) tibiotarsal articulation reaching to the level between eye to nostril when leg stretched forward; (8) disks on digits with circum-marginal grooves; (9) toes fully webbed to disks; (10) the first subarticular tubercle on fingers weak; (11) having white pectoral spinules, paired subgular vocal sacs located at corners of throat, light yellow nuptial pad on the first finger in males.

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            Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers.

            With a standard set of primers directed toward conserved regions, we have used the polymerase chain reaction to amplify homologous segments of mtDNA from more than 100 animal species, including mammals, birds, amphibians, fishes, and some invertebrates. Amplification and direct sequencing were possible using unpurified mtDNA from nanogram samples of fresh specimens and microgram amounts of tissues preserved for months in alcohol or decades in the dry state. The bird and fish sequences evolve with the same strong bias toward transitions that holds for mammals. However, because the light strand of birds is deficient in thymine, thymine to cytosine transitions are less common than in other taxa. Amino acid replacement in a segment of the cytochrome b gene is faster in mammals and birds than in fishes and the pattern of replacements fits the structural hypothesis for cytochrome b. The unexpectedly wide taxonomic utility of these primers offers opportunities for phylogenetic and population research.
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              A simplified table for staging anuran embryos and larvae with notes on identification

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                Author and article information

                Contributors
                Journal
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ Inc. (San Francisco, USA )
                2167-8359
                4 October 2018
                2018
                : 6
                : e5695
                Affiliations
                [1 ]Department of Food Science and Engineering, Maotai University , Renhuai, Guizhou, China
                [2 ]CAS Key Laboratory of Mountain Ecological Restoration and Bioresource Utilization & Ecological Restoration and Biodiversity Conservation Key Laboratory of Sichuan Province, Chengdu Institute of Biology, Chinese Academy of Sciences , Chengdu, Sichuan, China
                [3 ]Guizhou Institute of Biology, Guizhou Academy of Sciences , Guiyang, Guizhou, China
                [4 ]Biodiversity Conservation Key Laboratory, Guiyang College , Guiyang, Guizhou, China
                Article
                5695
                10.7717/peerj.5695
                6174872
                86b4d0dd-9ae1-4499-baf8-275bfeefab02
                © 2018 Li et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

                History
                : 20 April 2018
                : 5 September 2018
                Funding
                Funded by: Strategic Priority Research Program of the Chinese Academy of Sciences
                Award ID: XDB31000000
                Funded by: National Key Research and Development Program of China
                Award ID: 2017YFC0505202
                Funded by: National Natural Sciences Foundation of China
                Award ID: NSFC-31360144 and NSFC-31201702
                Funded by: Biodiversity Conservation Key Laboratory of Guizhou province Education Department, Guiyang College; the laboratory on biodiversity conservation and applied ecology of Guiyang college; Ocean Park Conservation Foundation, Hong Kong
                Award ID: PR 1030001252
                This study was supported by the following foundations: the Strategic Priority Research Program of the Chinese Academy of Sciences, Grant No. XDB31000000; the National Key Research and Development Program of China (No. 2017YFC0505202); the National Natural Sciences Foundation of China (Nos. NSFC-31360144 and NSFC-31201702); Biodiversity Conservation Key Laboratory of Guizhou province Education Department, Guiyang College; the laboratory on biodiversity conservation and applied ecology of Guiyang college; Ocean Park Conservation Foundation, Hong Kong (No. PR 1030001252). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Taxonomy
                Zoology

                taxonomy,odorrana kweichowensis sp. nov.,phylogenetic analyses,mitochondrial dna,nuclear dna,morphology,southwestern china

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