13
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Unveiling the role and life strategies of viruses from the surface to the dark ocean

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Viral activity exerts a particularly important role in the dark ocean across the global tropical and subtropical oceans.

          Abstract

          Viruses are a key component of marine ecosystems, but the assessment of their global role in regulating microbial communities and the flux of carbon is precluded by a paucity of data, particularly in the deep ocean. We assessed patterns in viral abundance and production and the role of viral lysis as a driver of prokaryote mortality, from surface to bathypelagic layers, across the tropical and subtropical oceans. Viral abundance showed significant differences between oceans in the epipelagic and mesopelagic, but not in the bathypelagic, and decreased with depth, with an average power-law scaling exponent of −1.03 km −1 from an average of 7.76 × 10 6 viruses ml −1 in the epipelagic to 0.62 × 10 6 viruses ml −1 in the bathypelagic layer with an average integrated (0 to 4000 m) viral stock of about 0.004 to 0.044 g C m −2, half of which is found below 775 m. Lysogenic viral production was higher than lytic viral production in surface waters, whereas the opposite was found in the bathypelagic, where prokaryotic mortality due to viruses was estimated to be 60 times higher than grazing. Free viruses had turnover times of 0.1 days in the bathypelagic, revealing that viruses in the bathypelagic are highly dynamic. On the basis of the rates of lysed prokaryotic cells, we estimated that viruses release 145 Gt C year −1 in the global tropical and subtropical oceans. The active viral processes reported here demonstrate the importance of viruses in the production of dissolved organic carbon in the dark ocean, a major pathway in carbon cycling.

          Related collections

          Most cited references57

          • Record: found
          • Abstract: not found
          • Article: not found

          Virioplankton: Viruses in Aquatic Ecosystems

            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Lytic to temperate switching of viral communities.

            Microbial viruses can control host abundances via density-dependent lytic predator-prey dynamics. Less clear is how temperate viruses, which coexist and replicate with their host, influence microbial communities. Here we show that virus-like particles are relatively less abundant at high host densities. This suggests suppressed lysis where established models predict lytic dynamics are favoured. Meta-analysis of published viral and microbial densities showed that this trend was widespread in diverse ecosystems ranging from soil to freshwater to human lungs. Experimental manipulations showed viral densities more consistent with temperate than lytic life cycles at increasing microbial abundance. An analysis of 24 coral reef viromes showed a relative increase in the abundance of hallmark genes encoded by temperate viruses with increased microbial abundance. Based on these four lines of evidence, we propose the Piggyback-the-Winner model wherein temperate dynamics become increasingly important in ecosystems with high microbial densities; thus 'more microbes, fewer viruses'.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Marine viruses: truth or dare.

              Over the past two decades, marine virology has progressed from a curiosity to an intensely studied topic of critical importance to oceanography. At concentrations of approximately 10 million viruses per milliliter of surface seawater, viruses are the most abundant biological entities in the oceans. The majority of these viruses are phages (viruses that infect bacteria). Through lysing their bacterial hosts, marine phages control bacterial abundance, affect community composition, and impact global biogeochemical cycles. In addition, phages influence their hosts through selection for resistance, horizontal gene transfer, and manipulation of bacterial metabolism. Recent work has also demonstrated that marine phages are extremely diverse and can carry a variety of auxiliary metabolic genes encoding critical ecological functions. This review is structured as a scientific "truth or dare," revealing several well-established "truths" about marine viruses and presenting a few "dares" for the research community to undertake in future studies.
                Bookmark

                Author and article information

                Journal
                Sci Adv
                Sci Adv
                SciAdv
                advances
                Science Advances
                American Association for the Advancement of Science
                2375-2548
                September 2017
                06 September 2017
                : 3
                : 9
                : e1602565
                Affiliations
                [1 ]Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar, Consell Superior d’Investigacions Científiques (ICM-CSIC), Passeig Marítim de la Barceloneta 37-49, 08003 Barcelona, Catalunya, Spain.
                [2 ]Institute of Marine Sciences, National Research Council (CNR-ISMAR), Castello 2737/F Arsenale-Tesa 104, 30122 Venezia, Italy.
                [3 ]School of Biotechnology and Biomolecular Sciences, Centre for Marine Bio-Innovation, University of New South Wales, Sydney, New South Wales 2052, Australia.
                [4 ]Departamento de Ecología y Biología Animal, Universidad de Vigo, University of Vigo, 36310 Vigo, Spain.
                [5 ]Centro Oceanográfico de Gijón/Xixón, Instituto Español de Oceanografía, Avenida Príncipe de Asturias, 70, 33212 Gijón/Xixón, Spain.
                [6 ]Red Sea Research Center, Division of Biological and Environmental Sciences and Engineering, King Abdullah University of Science and Technology, Thuwal 23955-6900, Saudi Arabia.
                [7 ]Instituto de Investigaciones Marinas, CSIC, Eduardo Cabello, 6, 36208 Vigo, Spain.
                [8 ]Departamento de Ecología and Instituto del Agua, Universidad de Granada, Avenida del Hospicio, S/N, 18010 Granada, Spain.
                [9 ]CNR-ISMAR, Largo Fiera della Pesca, 60125 Ancona, Italy.
                Author notes
                [* ]Corresponding author. Email: elaracasa@ 123456gmail.com
                Author information
                http://orcid.org/0000-0002-4625-348X
                http://orcid.org/0000-0002-9511-3002
                http://orcid.org/0000-0001-7737-6805
                http://orcid.org/0000-0001-5843-5806
                http://orcid.org/0000-0002-9786-1493
                http://orcid.org/0000-0002-9823-5339
                http://orcid.org/0000-0003-0536-7293
                http://orcid.org/0000-0001-5238-2387
                http://orcid.org/0000-0002-1213-1361
                Article
                1602565
                10.1126/sciadv.1602565
                5587022
                28913418
                86ff6e2e-fbec-4d38-926f-f7df2e64bc96
                Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC).

                This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial license, which permits use, distribution, and reproduction in any medium, so long as the resultant use is not for commercial advantage and provided the original work is properly cited.

                History
                : 24 October 2016
                : 09 August 2017
                Funding
                Funded by: King Abdullah University of Science and Technology (SA);
                Award ID: award322376
                Award ID: FCS/1/2449-01-01
                Funded by: Ministerio de Ciencia e Innovación (ES);
                Award ID: award322377
                Award ID: CSD2008-00077
                Categories
                Research Article
                Research Articles
                SciAdv r-articles
                Environmental Studies
                Marine Ecology
                Custom metadata
                Nielsen Santos

                Comments

                Comment on this article