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      Genome-Wide Screen for Genes Involved in Caenorhabditis elegans Developmentally Timed Sleep

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          Abstract

          In Caenorhabditis elegans, Notch signaling regulates developmentally timed sleep during the transition from L4 larval stage to adulthood (L4/A) . To identify core sleep pathways and to find genes acting downstream of Notch signaling, we undertook the first genome-wide, classical genetic screen focused on C. elegans developmentally timed sleep. To increase screen efficiency, we first looked for mutations that suppressed inappropriate anachronistic sleep in adult hsp:: osm-11 animals overexpressing the Notch coligand OSM-11 after heat shock. We retained suppressor lines that also had defects in L4/A developmentally timed sleep, without heat shock overexpression of the Notch coligand. Sixteen suppressor lines with defects in developmentally timed sleep were identified. One line carried a new allele of goa-1 ; loss of GOA-1o decreased C. elegans sleep. Another line carried a new allele of gpb-2 , encoding a Gβ 5 protein; Gβ 5 proteins have not been previously implicated in sleep. In other scenarios, Gβ 5 GPB-2 acts with regulators of G protein signaling (RGS proteins) EAT-16 and EGL-10 to terminate either EGL-30q signaling or GOA-1o signaling, respectively. We found that loss of Gβ 5 GPB-2 or RGS EAT-16 decreased L4/A sleep. By contrast, EGL-10 loss had no impact. Instead, loss of RGS-1 and RGS-2 increased sleep. Combined, our results suggest that, in the context of L4/A sleep, GPB-2 predominantly acts with EAT-16 RGS to inhibit EGL-30 Gαq signaling. These results confirm the importance of G protein signaling in sleep and demonstrate that these core sleep pathways function genetically downstream of the Notch signaling events promoting sleep.

          Most cited references32

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          High-Throughput Behavioral Analysis in C. elegans

          We have designed a real-time computer vision system, the Multi-Worm Tracker (MWT), that can simultaneously quantify the behavior of dozens of Caenorhabditis elegans on a traditional petri plate at video rates. Three traditional behavioral paradigms are examined using this system: spontaneous movement on food, where the behavior changes over tens of minutes; chemotaxis, where turning events must be detected accurately to determine strategy; and habituation of response to tap, where the response is stochastic and changes over time. In each case, manual analysis or automated single-worm tracking would be tedious and time-consuming, but the MWT system allows rapid quantification of behavior with minimal human effort. Thus, this system will enablelarge scale forward and reverse genetic screens for complex behaviors.
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            GTPase-activating proteins for heterotrimeric G proteins: regulators of G protein signaling (RGS) and RGS-like proteins.

            GTPase-activating proteins (GAPs) regulate heterotrimeric G proteins by increasing the rates at which their subunits hydrolyze bound GTP and thus return to the inactive state. G protein GAPs act allosterically on G subunits, in contrast to GAPs for the Ras-like monomeric GTP-binding proteins. Although they do not contribute directly to the chemistry of GTP hydrolysis, G protein GAPs can accelerate hydrolysis >2000-fold. G protein GAPs include both effector proteins (phospholipase C-¿, p115RhoGEF) and a growing family of regulators of G protein signaling (RGS proteins) that are found throughout the animal and fungal kingdoms. GAP activity can sharpen the termination of a signal upon removal of stimulus, attenuate a signal either as a feedback inhibitor or in response to a second input, promote regulatory association of other proteins, or redirect signaling within a G protein signaling network. GAPs are regulated by various controls of their cellular concentrations, by complex interactions with G¿ or with G¿5 through an endogenous G-like domain, and by interaction with multiple other proteins.
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              Animal sleep: a review of sleep duration across phylogeny.

              Sleep duration and placement within the twenty-four hour day have been primary indices utilized in the examination of sleep function. It is of value, therefore, to evaluate these variables in a wide range of animal species. The present paper examines the literature concerning sleep duration in over 150 animal species, including invertebrates, fish, amphibians, reptiles, birds, and 14 orders of mammals. We first present annotations of almost 200 studies, including number of animals used, photoperiod employed, sleep duration per twenty-four hours and placement of sleep period within the nychthemeron. Both behavioral and electrographic studies are reviewed, as are laboratory and field studies. These data are subsequently presented in a table with representative literature citations for each species. Following the table, a brief discussion is presented concerning some methodological issues which may affect the measurement of sleep duration and some suggestions are made for future examination of sleep duration.
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                Author and article information

                Journal
                G3 (Bethesda)
                Genetics
                G3: Genes, Genomes, Genetics
                G3: Genes, Genomes, Genetics
                G3: Genes, Genomes, Genetics
                G3: Genes|Genomes|Genetics
                Genetics Society of America
                2160-1836
                26 July 2017
                September 2017
                : 7
                : 9
                : 2907-2917
                Affiliations
                [* ]Department of Neuroscience, Brown University, Providence, Rhode Island 02912
                []Department of Ecology and Evolutionary Biology, Brown University, Providence, Rhode Island 02912
                Author notes
                [1 ]Corresponding authors: 660 South Euclid Ave., Box 8208, St. Louis, MO 63110. E-mail: huiyan.huang@ 123456wustl.edu ; and 185 Meeting St., Providence, RI 02912. E-mail: Anne_Hart@ 123456Brown.edu
                [2]

                Present address: Department of Pediatrics, Washington University School of Medicine, St. Louis, MO 63110.

                [3]

                Present address: Trait and Pipeline Delivery Analytics, Monsanto Research Center, Chesterfield, MO 63017.

                [4]

                Present address: Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139.

                Article
                GGG_300071
                10.1534/g3.117.300071
                5592919
                28743807
                92300826-5ec0-4948-82ab-56573103c473
                Copyright © 2017 Huang et al.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 04 May 2017
                : 21 July 2017
                Page count
                Figures: 6, Tables: 1, Equations: 0, References: 45, Pages: 11
                Categories
                Mutant Screen Report

                Genetics
                sleep,c. elegans,screen,g protein,goa-1,gpb-2,mutant screen report
                Genetics
                sleep, c. elegans, screen, g protein, goa-1, gpb-2, mutant screen report

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