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      Automatically Explaining Machine Learning Predictions on Severe Chronic Obstructive Pulmonary Disease Exacerbations: Retrospective Cohort Study

      research-article
      , MS 1 , , MD 2 , 3 , , DPhil 1 ,
      (Reviewer), (Reviewer)
      JMIR Medical Informatics
      JMIR Publications
      chronic obstructive pulmonary disease, forecasting, machine learning, patient care management

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          Abstract

          Background

          Chronic obstructive pulmonary disease (COPD) is a major cause of death and places a heavy burden on health care. To optimize the allocation of precious preventive care management resources and improve the outcomes for high-risk patients with COPD, we recently built the most accurate model to date to predict severe COPD exacerbations, which need inpatient stays or emergency department visits, in the following 12 months. Our model is a machine learning model. As is the case with most machine learning models, our model does not explain its predictions, forming a barrier for clinical use. Previously, we designed a method to automatically provide rule-type explanations for machine learning predictions and suggest tailored interventions with no loss of model performance. This method has been tested before for asthma outcome prediction but not for COPD outcome prediction.

          Objective

          This study aims to assess the generalizability of our automatic explanation method for predicting severe COPD exacerbations.

          Methods

          The patient cohort included all patients with COPD who visited the University of Washington Medicine facilities between 2011 and 2019. In a secondary analysis of 43,576 data instances, we used our formerly developed automatic explanation method to automatically explain our model’s predictions and suggest tailored interventions.

          Results

          Our method explained the predictions for 97.1% (100/103) of the patients with COPD whom our model correctly predicted to have severe COPD exacerbations in the following 12 months and the predictions for 73.6% (134/182) of the patients with COPD who had ≥1 severe COPD exacerbation in the following 12 months.

          Conclusions

          Our automatic explanation method worked well for predicting severe COPD exacerbations. After further improving our method, we hope to use it to facilitate future clinical use of our model.

          International Registered Report Identifier (IRRID)

          RR2-10.2196/13783

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          Most cited references82

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            A Survey of Methods for Explaining Black Box Models

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              Explainable machine-learning predictions for the prevention of hypoxaemia during surgery

              Although anaesthesiologists strive to avoid hypoxemia during surgery, reliably predicting future intraoperative hypoxemia is not currently possible. Here, we report the development and testing of a machine-learning-based system that, in real time during general anaesthesia, predicts the risk of hypoxemia and provides explanations of the risk factors. The system, which was trained on minute-by-minute data from the electronic medical records of over fifty thousand surgeries, improved the performance of anaesthesiologists when providing interpretable hypoxemia risks and contributing factors. The explanations for the predictions are broadly consistent with the literature and with prior knowledge from anaesthesiologists. Our results suggest that if anaesthesiologists currently anticipate 15% of hypoxemia events, with this system’s assistance they would anticipate 30% of them, a large portion of which may benefit from early intervention because they are associated with modifiable factors. The system can help improve the clinical understanding of hypoxemia risk during anaesthesia care by providing general insights into the exact changes in risk induced by certain patient or procedure characteristics.
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                Author and article information

                Contributors
                Journal
                JMIR Med Inform
                JMIR Med Inform
                JMI
                JMIR Medical Informatics
                JMIR Publications (Toronto, Canada )
                2291-9694
                February 2022
                25 February 2022
                : 10
                : 2
                : e33043
                Affiliations
                [1 ] Department of Biomedical Informatics and Medical Education University of Washington Seattle, WA United States
                [2 ] Medical Service San Francisco Veterans Affairs Medical Center San Francisco, CA United States
                [3 ] Department of Medicine University of California San Francisco, CA United States
                Author notes
                Corresponding Author: Gang Luo gangluo@ 123456cs.wisc.edu
                Author information
                https://orcid.org/0000-0001-9346-301X
                https://orcid.org/0000-0002-0116-9217
                https://orcid.org/0000-0001-7217-4008
                Article
                v10i2e33043
                10.2196/33043
                8917430
                35212634
                a77252b3-1af5-4ae6-ad6b-785f56debd4a
                ©Siyang Zeng, Mehrdad Arjomandi, Gang Luo. Originally published in JMIR Medical Informatics (https://medinform.jmir.org), 25.02.2022.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License ( https://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work, first published in JMIR Medical Informatics, is properly cited. The complete bibliographic information, a link to the original publication on https://medinform.jmir.org/, as well as this copyright and license information must be included.

                History
                : 26 August 2021
                : 13 November 2021
                : 15 November 2021
                : 2 January 2022
                Categories
                Original Paper
                Original Paper

                chronic obstructive pulmonary disease,forecasting,machine learning,patient care management

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